Evidence map›Paper›PMID 35472269›Full record

ReviewJournal of the Royal Society, Interface2022

Parameter estimation and uncertainty quantification using information geometry.

Jesse A Sharp, Alexander P Browning, Kevin Burrage, Matthew J Simpson

Abstract readReview
In one paragraph

Review in Journal of the Royal Society, Interface, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jesse A SharpSchool of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia.ORCID 0000-0002-2865-4853
Alexander P BrowningSchool of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia.ORCID 0000-0002-8753-1538
Kevin BurrageSchool of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia.
Matthew J SimpsonSchool of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia.ORCID 0000-0001-6254-313X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, we: (i) review likelihood-based inference for parameter estimation and the construction of confidence regions; and (ii) explore the use of techniques from information geometry, including geodesic curves and Riemann scalar curvature, to supplement typical techniques for uncertainty quantification, such as Bayesian methods, profile likelihood, asymptotic analysis and bootstrapping. These techniques from information geometry provide data-independent insights into uncertainty and identifiability, and can be used to inform data collection decisions. All code used in this work to implement the inference and information geometry techniques is available on GitHub.

Indexed as

Models, BiologicalBayes TheoremLikelihood FunctionsUncertaintyepidemic modelsinferencelikelihoodlogistic growthpopulation models

Identifiers

PMID35472269
PMCPMC9042578

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.