Evidence map›Paper›PMID 35472136›Full record

ArticleThe Journal of clinical investigation2022

An antibody targeting the N-terminal domain of SARS-CoV-2 disrupts the spike trimer.

Naveenchandra Suryadevara, Andrea R Shiakolas, Laura A VanBlargan, Elad Binshtein, Rita E Chen, James Brett Case, Kevin J Kramer, Erica C Armstrong, Luke Myers, Andrew Trivette and 11 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Naveenchandra SuryadevaraVanderbilt Vaccine Center and.
Andrea R ShiakolasVanderbilt Vaccine Center and.
Laura A VanBlarganDepartment of Medicine and.
Elad BinshteinVanderbilt Vaccine Center and.
Rita E ChenDepartment of Medicine and.
James Brett CaseDepartment of Medicine and.
Kevin J KramerVanderbilt Vaccine Center and.
Erica C ArmstrongVanderbilt Vaccine Center and.
Luke MyersVanderbilt Vaccine Center and.
Andrew TrivetteVanderbilt Vaccine Center and.
Christopher GainzaVanderbilt Vaccine Center and.
Rachel S NargiVanderbilt Vaccine Center and.
Christopher N SelverianIntegral Molecular, Philadelphia, Pennsylvania, USA.
Edgar DavidsonIntegral Molecular, Philadelphia, Pennsylvania, USA.
Benjamin J DoranzIntegral Molecular, Philadelphia, Pennsylvania, USA.
Summer M DiazVanderbilt Vaccine Center and.
Laura S HandalVanderbilt Vaccine Center and.
Robert H CarnahanVanderbilt Vaccine Center and.
Michael S DiamondDepartment of Medicine and.
Ivelin S GeorgievVanderbilt Vaccine Center and.
James E CroweVanderbilt Vaccine Center and.
Vanderbilt University Medical Center · USIntegral Molecular (United States) · USWashington University in St. Louis · US

Funding

NATIONAL RESEARCH SERVICE AWARD-MEDICAL SCIENTISTT32GM007200 · NIGMS · WASHINGTON UNIVERSITY · PI YOKOYAMA, WAYNE M. · 1985 to 2024
$59.8M
B-CELL EPITOPE DISCOVERY AND MECHANISMS OF ANTIBODY PROTECTION: Modification for SARS-CoV2 Research75N93019C00074 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CROWE, JAMES E · 2019 to 2024
$10.2M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
B-Cell Epitope Discovery and Mechanisms of Antibody Protection for ZIKV, MARV, VEEV Envelope Proteins 75N93019C00073 · NIAID · INTEGRAL MOLECULAR · PI DORANZ, BENJAMIN · 2019 to 2023
$7.5M
Human antibody-based countermeasures against the Wuhan Coronavirus SARS-CoV-2R01AI157155 · NIAID · WASHINGTON UNIVERSITY · PI BARIC, RALPH S, CROWE, JAMES E · 2020 to 2024
$6.0M
Neutralization Fingerprinting Analysis of Polyclonal Antibody Responses against HIV-1R01AI131722 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GEORGIEV, IVELIN · 2017 to 2021
$4.5M
NIAID NIH HHS 75N93019C00073NIAID NIH HHS 75N93019C00074NIAID NIH HHS R01 AI131722NIAID NIH HHS R01 AI157155NIGMS NIH HHS T32 GM007200NIGMS NIH HHS T32 GM008320
6 · The paper itself

Abstract

The protective human antibody response to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) focuses on the spike (S) protein, which decorates the virion surface and mediates cell binding and entry. Most SARS-CoV-2 protective antibodies target the receptor-binding domain or a single dominant epitope ("supersite") on the N-terminal domain (NTD). Using the single B cell technology called linking B cell receptor to antigen specificity through sequencing (LIBRA-Seq), we isolated a large panel of NTD-reactive and SARS-CoV-2-neutralizing antibodies from an individual who had recovered from COVID-19. We found that neutralizing antibodies against the NTD supersite were commonly encoded by the IGHV1-24 gene, forming a genetic cluster representing a public B cell clonotype. However, we also discovered a rare human antibody, COV2-3434, that recognizes a site of vulnerability on the SARS-CoV-2 S protein in the trimer interface (TI) and possesses a distinct class of functional activity. COV2-3434 disrupted the integrity of S protein trimers, inhibited the cell-to-cell spread of the virus in culture, and conferred protection in human angiotensin-converting enzyme 2-transgenic (ACE2-transgenic) mice against the SARS-CoV-2 challenge. This study provides insight into antibody targeting of the S protein TI region, suggesting this region may be a site of virus vulnerability.

Indexed as

COVID-19SARS-CoV-2AnimalsAntibodies, NeutralizingAntibodies, ViralHumansMiceSpike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Adaptive immunityAntigenImmunoglobulinsImmunologyVirology

Identifiers

PMID35472136
PMCPMC9151704
OpenAlexW4225898036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.