Evidence map›Paper›PMID 35471904›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

A saturation mutagenesis screen uncovers resistant and sensitizing secondary

Siyu Feng, Marinella G Callow, Jean-Philippe Fortin, Zia Khan, David Bray, Mike Costa, Zhen Shi, Weiru Wang, Marie Evangelista

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Targeted therapeutic strategies forTranslational lung cancer research · 2026
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  14. Enhancing efficacy of the MEK inhibitor trametinib with paclitaxel inTherapeutic advances in medical oncology · 2024
    Article
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  16. Article
  17. Review
  18. Review
  19. Direct GDP-KRASTherapeutic advances in medical oncology · 2023
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution.

Siyu FengDepartment of Discovery Oncology, Genentech, Inc., South San Francisco, CA 94080.ORCID 0000-0001-8499-6914
Marinella G CallowDepartment of Discovery Oncology, Genentech, Inc., South San Francisco, CA 94080.ORCID 0000-0003-2560-5412
Jean-Philippe FortinDepartment of Bioinformatics, Genentech, Inc., South San Francisco, CA 94080.
Zia KhanDepartment of Human Genetics, Genentech, Inc., South San Francisco, CA 94080.ORCID 0000-0002-7859-3489
David BrayFoundation Medicine, Inc., Cambridge, MA 02141.
Mike CostaDepartment of Discovery Oncology, Genentech, Inc., South San Francisco, CA 94080.
Zhen ShiDepartment of Oncology Biomarker Development, Genentech, Inc., South San Francisco, CA 94080.
Weiru WangDepartment of Structural Biology, Genentech, Inc., South San Francisco, CA 94080.
Marie EvangelistaDepartment of Discovery Oncology, Genentech, Inc., South San Francisco, CA 94080.
Foundation Medicine (United States)

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutant-specific inhibitors of KRASG12C, such as AMG510 (sotorasib) and MRTX849 (adagrasib), offer the unprecedented opportunity to inhibit KRAS, the most frequently mutated and heretofore undruggable oncoprotein. While clinical data are still limited, on-target mutations in KRASG12C at position 12 and other sites are emerging as major drivers of clinical relapse. We identified additional mutations in KRASG12C that impact inhibitor sensitivity through a saturation mutagenesis screen in the KRASG12C NCI-H358 non–small-cell lung cancer (NSCLC) cell line. We also identified individuals in population genetic databases harboring these resistance mutations in their germline and in tumors, including a subset that co-occur with KRASG12C, indicating that these mutations may preexist in patients treated with KRASG12C inhibitors. Notably, through structural modeling, we found that one such mutation (R68L) interferes with the critical protein–drug interface, conferring resistance to both inhibitors. Finally, we uncovered a mutant (S17E) that demonstrated a strong sensitizing phenotype to both inhibitors. Functional studies suggest that S17E sensitizes KRASG12C cells to KRASG12C inhibition by impacting signaling through PI3K/AKT/mTOR but not the MAPK signaling pathway. Our studies highlight the utility of unbiased mutation profiling to understand the functional consequences of all variants of a disease-causing genetic mutant and predict acquired resistant mutations in the targeted therapeutics.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsHumansMutagenesisMutationPiperazinesProto-Oncogene Proteins p21(ras)PyridinesPyrimidinesKRAS protein, humanPiperazinesProto-Oncogene Proteins p21(ras)PyridinesPyrimidinesadagrasibdrug resistanceKRASG12Cmutagenesis screensotorasib

Identifiers

PMID35471904
PMCPMC9170150
OpenAlexW4224987182

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.