Evidence map›Paper›PMID 35468979›Full record

ArticleScientific reports2022

Transcriptomic analysis of OsRUS1 overexpression rice lines with rapid and dynamic leaf rolling morphology.

Ning Yu, Yaping Liang, Qingping Wang, Xinxiang Peng, Zhenghui He, Xuewen Hou

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Frontiers in plant science · 2025
    Article
  4. Article
  5. Plants (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Frontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ning YuCenter for Photosynthesis and Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Yaping LiangCenter for Photosynthesis and Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Qingping WangCenter for Photosynthesis and Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Xinxiang PengCenter for Photosynthesis and Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China.
Zhenghui HeDepartment of Biology, San Francisco State University, 1600 Holloway Avenue, San Francisco, CA, 94132, USA.
Xuewen HouCenter for Photosynthesis and Plant Stress Biology, College of Life Sciences, South-China Agricultural University, Guangzhou, 510642, China. hxw1969@scau.edu.cn.ORCID 0000-0002-6448-5292
South China Agricultural University · CNSan Francisco State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Moderate leaf rolling helps to form the ideotype of rice. In this study, six independent OsRUS1-GFP overexpression (OsRUS1-OX) transgenic rice lines with rapid and dynamic leaf rolling phenotype in response to sunlight were constructed. However, the mechanism is unknown. Here, RNA-Seq approach was utilized to identify differentially expressed genes between flag leaves of OsRUS1-OX and wildtype under sunlight. 2920 genes were differentially expressed between OsRUS1-OX and WT, of which 1660 upregulated and 1260 downregulated. Six of the 16 genes in GO: 0009415 (response to water stimulus) were significantly upregulated in OsRUS1-OX. The differentially expressed genes between WT and OsRUS1-OX were assigned to 110 KEGG pathways. 42 of the 222 genes in KEGG pathway dosa04075 (Plant hormone signal transduction) were differentially expressed between WT and OsRUS1-OX. The identified genes in GO:0009415 and KEGG pathway dosa04075 were good candidates to explain the leaf rolling phenotype of OsRUS1-OX. The expression patterns of the 15 genes identified by RNA-Seq were verified by qRT-PCR. Based on transcriptomic and qRT-PCR analysis, a mechanism for the leaf rolling phenotype of OsRUS1-OX was proposed. The differential expression profiles between WT and OsRUS1-OX established by this study provide important insights into the molecular mechanism behind the leaf rolling phenotype of OsRUS1-OX.

Indexed as

OryzaGene Expression ProfilingGene Expression Regulation, PlantPlant LeavesTranscriptome

Identifiers

PMID35468979
PMCPMC9038715
OpenAlexW4224439911

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.