Evidence map›Paper›PMID 35468919›Full record

ArticleNature communications2022

Deletion and tandem duplications of biosynthetic genes drive the diversity of triterpenoids in Aralia elata.

Yu Wang, He Zhang, Hyok Chol Ri, Zeyu An, Xin Wang, Jia-Nan Zhou, Dongran Zheng, Hao Wu, Pengchao Wang, Jianfei Yang and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. Total saponins fromJournal of ginseng research · 2026
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  16. Advancing the Potential ofMolecules (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Yu Wang *State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China.ORCID 0000-0003-1753-0289
He Zhang *College of Life Sciences, Northeast Forestry University, Harbin, 150040, China.ORCID 0000-0001-8123-7066
Hyok Chol Ri *College of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Zeyu An *College of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Xin WangCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Jia-Nan ZhouCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Dongran ZhengCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Hao WuCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Pengchao WangCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Jianfei YangSchool of Forestry, Northeast Forestry University, Harbin, 150040, China.
Ding-Kun LiuKey Laboratory of Orchid Conservation and Utilization of National Forestry and Grassland Administration at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Diyang ZhangKey Laboratory of Orchid Conservation and Utilization of National Forestry and Grassland Administration at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.ORCID 0000-0001-7548-4378
Wen-Chieh TsaiOrchid Research and Development Center, National Cheng Kung University, Tainan, 701, Taiwan, China.ORCID 0000-0001-9389-168X
Zheyong XueCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.ORCID 0000-0002-7203-9794
Zhichao XuCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China.
Peng ZhangSchool of Forestry, Northeast Forestry University, Harbin, 150040, China. zhangpeng@nefu.edu.cn.ORCID 0000-0001-9891-0093
Zhong-Jian LiuKey Laboratory of Orchid Conservation and Utilization of National Forestry and Grassland Administration at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. zjliu@fafu.edu.cn.ORCID 0000-0003-4390-3878
Hailong ShenState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, China. shenhl-cf@nefu.edu.cn.ORCID 0000-0002-9610-6285
Yuhua LiCollege of Life Sciences, Northeast Forestry University, Harbin, 150040, China. lyhshen@126.com.ORCID 0000-0002-0405-2823
Northeast Forestry University · CNFujian Agriculture and Forestry University · CNNational Cheng Kung University · TWPyongyang University of Science and Technology · KPState Forestry and Grassland Administration · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Araliaceae species produce various classes of triterpene and triterpenoid saponins, such as the oleanane-type triterpenoids in Aralia species and dammarane-type saponins in Panax, valued for their medicinal properties. The lack of genome sequences of Panax relatives has hindered mechanistic insight into the divergence of triterpene saponins in Araliaceae. Here, we report a chromosome-level genome of Aralia elata with a total length of 1.05 Gb. The loss of 12 exons in the dammarenediol synthase (DDS)-encoding gene in A. elata after divergence from Panax might have caused the lack of dammarane-type saponin production, and a complementation assay shows that overexpression of the PgDDS gene from Panax ginseng in callus of A. elata recovers the accumulation of dammarane-type saponins. Tandem duplication events of triterpene biosynthetic genes are common in the A. elata genome, especially for AeCYP72As, AeCSLMs, and AeUGT73s, which function as tailoring enzymes of oleanane-type saponins and aralosides. More than 13 aralosides are de novo synthesized in Saccharomyces cerevisiae by overexpression of these genes in combination. This study sheds light on the diversity of saponins biosynthetic pathway in Araliaceae and will facilitate heterologous bioproduction of aralosides.

Indexed as

AraliaPanaxSaponinsTriterpenesSaponinsTriterpenes

Identifiers

PMID35468919
PMCPMC9038795
OpenAlexW4224949227

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.