Evidence map›Paper›PMID 35468728›Full record

ArticleBMC plant biology2022

Genome-wide identification and expression profiling analysis of sucrose synthase (SUS) and sucrose phosphate synthase (SPS) genes family in Actinidia chinensis and A. eriantha.

Guanglian Liao, Yiqi Li, Hailing Wang, Qing Liu, Min Zhong, Dongfeng Jia, Chunhui Huang, Xiaobiao Xu

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 48 citations in OpenAlex.

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  16. Frontiers in plant science · 2024
    Article
  17. Article
  18. Physiological and sucrose metabolic responses to waterlogging stress in balloon flower (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Guanglian LiaoCollege of Forestry, Jiangxi Provincial Key Laboratory of Silviculture, Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.ORCID http://orcid.org/0000-0002-8949-630X
Yiqi LiCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Hailing WangCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Qing LiuCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Min ZhongCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Dongfeng JiaCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Chunhui HuangCollege of Agronomy, Jiangxi Agricultural University, Kiwifruit Institute of Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China.
Xiaobiao XuCollege of Forestry, Jiangxi Provincial Key Laboratory of Silviculture, Jiangxi Agricultural University, 330045, Nanchang Jiangxi, P. R. China. xbxu@jxau.edu.cn.ORCID http://orcid.org/0000-0001-7357-6295
Jiangxi Agricultural University · CN

Funding

Foundation for Innovative Research Groups of the National Natural Science Foundation of China 31760559
6 · The paper itself

Abstract

Sucrose synthase (SUS) is a common sugar-base transfer enzyme in plants, and sucrose phosphate synthase (SPS) is one of the major enzymes in higher plants that regulates sucrose synthesis. However, information of the SPS and SUS gene families in Actinidia, as well as their evolutionary and functional properties, is limited. According to the SPS and SUS proteins conserved domain of Arabidopsis thaliana, we found 6 SPS genes and 6 SUS genes from A. chinensis (cultivar: 'Hongyang'), and 3 SPS genes and 6 SUS genes from A. eriantha (cultivar: 'White'). The novel CDC50 conserved domains were discovered on AcSUS2, and all members of the gene family contain similar distinctive conserved domains. The majority of SUS and SPS proteins were hydrophilic, lipid-soluble enzymes that were expected to be found in the cytoplasm. The tertiary structure of SPS and SUS protein indicated that there were many tertiary structures in SPS, and there were windmill-type and spider-type tertiary structures in SUS. The phylogenetic tree was created using the neighbor-joining method, and members of the SPS and SUS gene families are grouped into three subgroups. Genes with comparable intron counts, conserved motifs, and phosphorylation sites were clustered together first. SPS and SUS were formed through replication among their own family members. AcSPS1, AcSPS2, AcSPS4, AcSPS5, AcSUS5, AcSUS6, AeSPS3, AeSUS3 and AeSUS4 were the important genes in regulating the synthesis and accumulation of sucrose for Actinidia during the fruit growth stages.

Indexed as

ActinidiaArabidopsisGene Expression Regulation, PlantGlucosyltransferasesPhylogenySucroseGlucosyltransferasesSucrosesucrose-phosphate synthasesucrose synthaseActinidiaBioinformatics analysisExpression profiling analysisGeneSucrose phosphate synthaseSucrose synthase

Identifiers

PMID35468728
PMCPMC9040251
OpenAlexW4224863996

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.