Evidence map›Paper›PMID 35468125›Full record

ArticlePLoS genetics2022

MiR172-APETALA2-like genes integrate vernalization and plant age to control flowering time in wheat.

Juan M Debernardi, Daniel P Woods, Kun Li, Chengxia Li, Jorge Dubcovsky

Expression of concernOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It carries an expression of concern. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. RNA regulation in plants.Science China. Life sciences · 2026
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  6. Horticulture research · 2026
    Article
  7. Article
  8. Genetic control of seasonal meristem arrest in trees.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Review
  10. Article
  11. Effects of five allelic variants of the wheat vernalization geneMolecular breeding : new strategies in plant improvement · 2025
    Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Accumulation of mutations in theMolecular breeding : new strategies in plant improvement · 2024
    Article
  18. A 49-bp deletion ofHorticulture research · 2024
    Article
  19. Overexpression of lily MicroRNA156-resistantFrontiers in plant science · 2024
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Juan M DebernardiDepartment of Plant Sciences, University of California, Davis, California, United States of America.ORCID 0000-0002-4591-7061
Daniel P WoodsDepartment of Plant Sciences, University of California, Davis, California, United States of America.ORCID 0000-0002-1498-5707
Kun LiDepartment of Plant Sciences, University of California, Davis, California, United States of America.ORCID 0000-0001-8308-1560
Chengxia LiDepartment of Plant Sciences, University of California, Davis, California, United States of America.ORCID 0000-0003-4634-8451
Jorge DubcovskyDepartment of Plant Sciences, University of California, Davis, California, United States of America.ORCID 0000-0002-7571-4345
Howard Hughes Medical Institute · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Plants possess regulatory mechanisms that allow them to flower under conditions that maximize reproductive success. Selection of natural variants affecting those mechanisms has been critical in agriculture to modulate the flowering response of crops to specific environments and to increase yield. In the temperate cereals, wheat and barley, the photoperiod and vernalization pathways explain most of the natural variation in flowering time. However, other pathways also participate in fine-tuning the flowering response. In this work, we integrate the conserved microRNA miR172 and its targets APETALA2-like (AP2L) genes into the temperate grass flowering network involving VERNALIZATION 1 (VRN1), VRN2 and FLOWERING LOCUS T 1 (FT1 = VRN3) genes. Using mutants, transgenics and different growing conditions, we show that miR172 promotes flowering in wheat, while its target genes AP2L1 (TaTOE1) and AP2L5 (Q) act as flowering repressors. Moreover, we reveal that the miR172-AP2L pathway regulates FT1 expression in the leaves, and that this regulation is independent of VRN2 and VRN1. In addition, we show that the miR172-AP2L module and flowering are both controlled by plant age through miR156 in spring cultivars. However, in winter cultivars, flowering and the regulation of AP2L1 expression are decoupled from miR156 downregulation with age, and induction of VRN1 by vernalization is required to repress AP2L1 in the leaves and promote flowering. Interestingly, the levels of miR172 and both AP2L genes modulate the flowering response to different vernalization treatments in winter cultivars. In summary, our results show that conserved and grass specific gene networks interact to modulate the flowering response, and that natural or induced mutations in AP2L genes are useful tools for fine-tuning wheat flowering time in a changing environment.

Indexed as

Genes, PlantTriticumFlowersGene Expression Regulation, PlantPhotoperiodPoaceae

Identifiers

PMID35468125
PMCPMC9037917
OpenAlexW4224867970

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.