Evidence map›Paper›PMID 35467369›Full record

ArticleAntimicrobial agents and chemotherapy2022

Express Yourself: Quantitative Real-Time PCR Assays for Rapid Chromosomal Antimicrobial Resistance Detection in Pseudomonas aeruginosa.

Danielle E Madden, Olusola Olagoke, Timothy Baird, Jane Neill, Kay A Ramsay, Tamieka A Fraser, Scott C Bell, Derek S Sarovich, Erin P Price

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Observational
  5. Review
  6. Article
  7. Article
  8. Machine Learning Techniques for Antimicrobial Resistance Prediction ofComputational intelligence and neuroscience · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Danielle E MaddenCentre for Bioinnovation, University of the Sunshine Coastgrid.1034.6, Sippy Downs, Queensland, Australia.ORCID 0000-0003-3261-750X
Olusola OlagokeCentre for Bioinnovation, University of the Sunshine Coastgrid.1034.6, Sippy Downs, Queensland, Australia.ORCID 0000-0002-4093-2086
Timothy BairdSunshine Coast Health Institute, Birtinya, Queensland, Australia.ORCID 0000-0003-2491-4344
Jane NeillSunshine Coast Health Institute, Birtinya, Queensland, Australia.
Kay A RamsayChild Health Research Centre, The University of Queenslandgrid.1003.2, South Brisbane, Queensland, Australia.ORCID 0000-0002-6682-9351
Tamieka A FraserCentre for Bioinnovation, University of the Sunshine Coastgrid.1034.6, Sippy Downs, Queensland, Australia.ORCID 0000-0001-7960-2458
Scott C BellChild Health Research Centre, The University of Queenslandgrid.1003.2, South Brisbane, Queensland, Australia.ORCID 0000-0001-8651-7139
Derek S Sarovich *Centre for Bioinnovation, University of the Sunshine Coastgrid.1034.6, Sippy Downs, Queensland, Australia.ORCID 0000-0002-6944-3980
Erin P Price *Centre for Bioinnovation, University of the Sunshine Coastgrid.1034.6, Sippy Downs, Queensland, Australia.ORCID 0000-0002-1079-4882
University of the Sunshine Coast · AUSunshine Coast University Hospital · AUThe University of Queensland · AUTranslational Research Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rise of antimicrobial-resistant (AMR) bacteria is a global health emergency. One critical facet of tackling this epidemic is more rapid AMR diagnosis in serious multidrug-resistant pathogens like Pseudomonas aeruginosa. Here, we designed and then validated two multiplex quantitative real-time PCR (qPCR) assays to simultaneously detect differential expression of the resistance-nodulation-division efflux pumps MexAB-OprM, MexCD-OprJ, MexEF-OprN, and MexXY-OprM, the AmpC β-lactamase, and the porin OprD, which are commonly associated with chromosomally encoded AMR. Next, qPCRs were tested on 15 sputa from 11 participants with P. aeruginosa respiratory infections to determine AMR profiles

Indexed as

Cystic FibrosisPseudomonas InfectionsAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsCarbapenemsDrug Resistance, BacterialHumansMembrane Transport ProteinsMicrobial Sensitivity TestsPseudomonas aeruginosaReal-Time Polymerase Chain ReactionAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsCarbapenemsMembrane Transport ProteinsampCAMRantibioticantibiotic resistanceassay developmentdiagnosticsefflux pumpsgene expressiongenomicsin vivo expression technologyPseudomonas aeruginosaqPCR

Identifiers

PMID35467369
PMCPMC9112894
OpenAlexW4225891741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.