ArticlePhysiology and molecular biology of plants : an international journal of functional plant biology2022
GWAS for main effects and epistatic interactions for grain morphology traits in wheat.
Article in Physiology and molecular biology of plants : an international journal of functional plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.
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Who cites it
10 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Identification of quantitative trait loci (QTL) and meta-QTL analysis for kernel size-related traits in wheat (Triticum aestivum L.).BMC plant biology · 2022Pooled it
- Multi-parent mapping reveals epistatic architecture and elite haplotypes for multi-trait improvement in cotton.Genome biology · 2026Article
- Multi-model GWAS reveals genetic determinants of grain hardness, size and weight in bread wheat (Triticum aestivum L.).Molecular genetics and genomics : MGG · 2026Article
- Population structure, genetic diversity and genome-wide association analysis of the seed morphology traits in Handroanthus chrysanthus (Jacq.) s.o.grose.BMC plant biology · 2025Article
- Conditional QTL Analysis and Fine Mapping for Thousand-Kernel Weight in Common Wheat.Plants (Basel, Switzerland) · 2025Article
- Genetic architecture of ideotype-related traits in middle American beans through single trait, multi-trait and epistatic genome-wide analyses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Epistasis and pleiotropy-induced variation for plant breeding.Plant biotechnology journal · 2024Review
- Genetic analysis of iron, zinc and grain yield in wheat-Aegilops derivatives using multi-locus GWAS.Molecular biology reports · 2023Article
- GWAS and genomic prediction for pre-harvest sprouting tolerance involving sprouting score and two other related traits in spring wheat.Molecular breeding : new strategies in plant improvement · 2023Article
- Genetics of spot blotch resistance in bread wheat (Frontiers in plant science · 2022Article
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7 authors.
Funding
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Abstract
In the present study in wheat, GWAS was conducted for identification of marker trait associations (MTAs) for the following six grain morphology traits: (1) grain cross-sectional area (GCSA), (2) grain perimeter (GP), (3) grain length (GL), (4) grain width (GWid), (5) grain length-width ratio (GLWR) and (6) grain form-density (GFD). The data were recorded on a subset of spring wheat reference set (SWRS) comprising 225 diverse genotypes, which were genotyped using 10,904 SNPs and phenotyped for two consecutive years (2017-2018, 2018-2019). GWAS was conducted using five different models including two single-locus models (CMLM, SUPER), one multi-locus model (FarmCPU), one multi-trait model (mvLMM) and a model for Q x Q epistatic interactions. False discovery rate (FDR) [ Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-022-01164-w.
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