Evidence map›Paper›PMID 35465199›Full record

ArticlePhysiology and molecular biology of plants : an international journal of functional plant biology2022

Meta-QTLs, ortho-MetaQTLs and candidate genes for grain Fe and Zn contents in wheat (

Rakhi Singh, Gautam Saripalli, Tinku Gautam, Anuj Kumar, Irfat Jan, Ritu Batra, Jitendra Kumar, Rahul Kumar, Harindra Singh Balyan, Shailendra Sharma and 1 more

Open access · greenAbstract read
In one paragraph

Article in Physiology and molecular biology of plants : an international journal of functional plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Further studies on pyramiding of alien genes for high grain Fe and Zn in bread wheat.Molecular breeding : new strategies in plant improvement · 2025
    Article
  6. Article
  7. Review
  8. Molecular characterization of QTL for grain zinc and iron concentrations in wheat landrace Chinese Spring.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  9. Article
  10. Meta-QTL analysis in wheat: progress, challenges and opportunities.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Review
  11. Article
  12. Meta-QTLs, ortho-meta QTLs and related candidate genes for yield and its component traits under water stress in wheat (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Rakhi SinghDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Gautam SaripalliDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Tinku GautamDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Anuj KumarDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Irfat JanDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Ritu BatraDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Jitendra KumarDept. of Biotechnology, Govt. of India, National Agri-Food Biotechnology Institute (NABI), Sector 81 (Knowledge City), S.A.S. Nagar, 140306 Mohali, Punjab India.
Rahul KumarDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Harindra Singh BalyanDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Shailendra SharmaDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.ORCID 0000-0002-0803-5203
Pushpendra Kumar GuptaDepartment of Genetics and Plant Breeding, Ch. Charan Singh University, 250 004 Meerut, U.P India.
Chaudhary Charan Singh University · INNational Agri-Food Biotechnology Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Majority of cereals are deficient in essential micronutrients including grain iron (GFe) and grain zinc (GZn), which are therefore the subject of research involving biofortification. In the present study, 11 meta-QTLs (MQTLs) including nine novel MQTLs for GFe and GZn contents were identified in wheat. Eight of these 11 MQTLs controlled both GFe and GZn. The confidence intervals of the MQTLs were narrower (0.51-15.75 cM) relative to those of the corresponding QTLs (0.6 to 55.1 cM). Two ortho-MQTLs involving three cereals (wheat, rice and maize) were also identified. Results of MQTLs were also compared with the results of earlier genome wide association studies (GWAS). As many as 101 candidate genes (CGs) underlying MQTLs were also identified. Twelve of these CGs were prioritized; these CGs encoded proteins with important domains (zinc finger, RING/FYVE/PHD type, flavin adenine dinucleotide linked oxidase, etc.) that are involved in metal ion binding, heme binding, iron binding, etc. qRT-PCR analysis was conducted for four of these 12 prioritized CGs using genotypes which have differed for GFe and GZn. Significant differential expression in these genotypes was observed at 14 and 28 days after anthesis. The MQTLs/CGs identified in the present study may be utilized in marker-assisted selection (MAS) for improvement of GFe/GZn contents and also for understanding the molecular basis of GFe/GZn homeostasis in wheat. Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-022-01149-9.

Indexed as

Candidate genesGrain iron (GFe)Grain zinc (GZn)meta-QTLOrtho-meta QTLqRT-PCRWheat

Identifiers

PMID35465199
PMCPMC8986950
OpenAlexW4220664389

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.