Evidence map›Paper›PMID 35464859›Full record

ArticleFrontiers in genetics2022

Single Stranded Fully Modified-Phosphorothioate Oligonucleotides can Induce Structured Nuclear Inclusions, Alter Nuclear Protein Localization and Disturb the Transcriptome

Loren L Flynn, Ruohan Li, Ianthe L Pitout, May T Aung-Htut, Leon M Larcher, Jack A L Cooper, Kane L Greer, Alysia Hubbard, Lisa Griffiths, Charles S Bond and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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  15. Brain-Targeting siRNA Delivery to Tackle Alzheimer's Disease.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Loren L FlynnCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
Ruohan LiCell and Tissue Therapies WA, Royal Perth Hospital, Perth, WA, Australia.
Ianthe L PitoutCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
May T Aung-HtutCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
Leon M LarcherCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
Jack A L CooperSchool of Human Sciences, The University of Western Australia, Nedlands, WA, Australia.
Kane L GreerCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
Alysia HubbardCentre for Microscopy, Characterization and Analysis, The University of Western Australia, Nedlands, WA, Australia.
Lisa GriffithsAnatomical Pathology, Department of Health, Nedlands, WA, Australia.
Charles S BondSchool of Molecular Sciences, The University of Western Australia, Nedlands, WA, Australia.
Steve D WiltonCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
Archa H FoxSchool of Human Sciences, The University of Western Australia, Nedlands, WA, Australia.
Sue FletcherCentre for Molecular Medicine and Innovative Therapeutics, Health Futures Institute, Murdoch University, Murdoch, WA, Australia.
University of Western Australia · AUMurdoch University · AUAvenir Health · USPerron Institute for Neurological and Translational Science · AUGovernment of Western Australia Department of Health · AURoyal Perth Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oligonucleotides and nucleic acid analogues that alter gene expression are now showing therapeutic promise in human disease. Whilst the modification of synthetic nucleic acids to protect against nuclease degradation and to influence drug function is common practice, such modifications may also confer unexpected physicochemical and biological properties. Gapmer mixed-modified and DNA oligonucleotides on a phosphorothioate backbone can bind non-specifically to intracellular proteins to form a variety of toxic inclusions, driven by the phosphorothioate linkages, but also influenced by the oligonucleotide sequence. Recently, the non-antisense or other off-target effects of 2'

Indexed as

antisense oligonucleotidesmorpholino oligomernuclear laminaparaspeckle nuclear organellesphosphorothioateRNA analogueRNA processing

Identifiers

PMID35464859
PMCPMC9019733
OpenAlexW4225351670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.