Evidence map›Paper›PMID 35461521›Full record

ArticleThe Lancet. Global health2022

The seasonality of cholera in sub-Saharan Africa: a statistical modelling study.

Javier Perez-Saez, Justin Lessler, Elizabeth C Lee, Francisco J Luquero, Espoir Bwenge Malembaka, Flavio Finger, José Paulo Langa, Sebastian Yennan, Benjamin Zaitchik, Andrew S Azman

Abstract read
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Article in The Lancet. Global health, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. A case for using spatial evidence in waterborne disease control.Bulletin of the World Health Organization · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Cholera in Africa: A Climate Change Crisis.Journal of epidemiology and global health · 2025
    Review
  8. Whole genome sequencing and transmission analysis ofmedRxiv : the preprint server for health sciences · 2025
    Article
  9. Article
  10. Stress adaptation underMicrobiology spectrum · 2025
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Unmasking the Neglected Cholera Outbreaks in Sub-Saharan Africa.International journal of public health · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Javier Perez-SaezDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA; Unité d'Épidémiologie Populationnelle, Geneva University Hospitals, Geneva, Switzerland.
Justin LesslerDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA; Department of Epidemiology, Gillings School of Global Public Health, and University of North Carolina Population Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Elizabeth C LeeDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA.
Francisco J LuqueroGavi, the Vaccine Alliance, Geneva, Switzerland.
Espoir Bwenge MalembakaDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA; Center for Tropical Diseases and Global Health, Université Catholique de Bukavu, Bukavu, Democratic Republic of the Congo.
Flavio FingerEpicentre, Paris, France.
José Paulo LangaInstituto Nacional de Saúde, Maputo, Mozambique.
Sebastian YennanSurveillance and Epidemiology, Nigeria Centre for Disease Control, Abuja, Nigeria.
Benjamin ZaitchikDepartment of Earth and Planetary Sciences, Johns Hopkins University, Baltimore, MD, USA.
Andrew S AzmanDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA; Unité d'Épidémiologie Populationnelle, Geneva University Hospitals, Geneva, Switzerland; Institute of Global Health, Faculty of Medicine, University of Geneva, Geneva, Switzerland. Electronic address: azman@jhu.edu.

Funding

Gates Foundation INV-002667
6 · The paper itself

Abstract

backgroundCholera remains a major threat in sub-Saharan Africa (SSA), where some of the highest case-fatality rates are reported. Knowing in what months and where cholera tends to occur across the continent could aid in improving efforts to eliminate cholera as a public health concern. However, largely due to the absence of unified large-scale datasets, no continent-wide estimates exist. In this study, we aimed to estimate cholera seasonality across SSA and explore the correlation between hydroclimatic variables and cholera seasonality.

methodsUsing the global cholera database of the Global Task Force on Cholera Control, we developed statistical models to synthesise data across spatial and temporal scales to infer the seasonality of excess (defined as incidence higher than the 2010-16 mean incidence rate) suspected cholera occurrence in SSA. We developed a Bayesian statistical model to infer the monthly risk of excess cholera at the first and second administrative levels. Seasonality patterns were then grouped into spatial clusters. Finally, we studied the association between seasonality estimates and hydroclimatic variables (mean monthly fraction of area flooded, mean monthly air temperature, and cumulative monthly precipitation).

findings24 (71%) of the 34 countries studied had seasonal patterns of excess cholera risk, corresponding to approximately 86% of the SSA population. 12 (50%) of these 24 countries also had subnational differences in seasonality patterns, with strong differences in seasonality strength between regions. Seasonality patterns clustered into two macroregions (west Africa and the Sahel vs eastern and southern Africa), which were composed of subregional clusters with varying degrees of seasonality. Exploratory association analysis found most consistent and positive correlations between cholera seasonality and precipitation and, to a lesser extent, between cholera seasonality and temperature and flooding.

interpretationWidespread cholera seasonality in SSA offers opportunities for intervention planning. Further studies are needed to study the association between cholera and climate.

fundingUS National Aeronautics and Space Administration Applied Sciences Program and the Bill & Melinda Gates Foundation.

Indexed as

CholeraAfrica South of the SaharaBayes TheoremHumansIncidenceModels, Statistical

Identifiers

PMID35461521
PMCPMC9090905

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.