Evidence map›Paper›PMID 35460799›Full record

ArticleThe Journal of hospital infection2022

A fatal outbreak of neonatal sepsis caused by mcr-10-carrying Enterobacter kobei in a tertiary care hospital in Nepal.

S Manandhar, Q Nguyen, D T Pham, P Amatya, M Rabaa, S Dongol, B Basnyat, S M Dixit, S Baker, A Karkey

Open access · hybridAbstract read
In one paragraph

Article in The Journal of hospital infection, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. Integrated Genomic and Phenotypic Characterization of anTransboundary and emerging diseases · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

S ManandharOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal; Centre for Tropical Medicine and Global Health, Medical Sciences Division, Nuffield Department of Medicine, University of Oxford, Linacre College, Oxford, UK.
Q NguyenOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
D T PhamCentre for Tropical Medicine and Global Health, Medical Sciences Division, Nuffield Department of Medicine, University of Oxford, Linacre College, Oxford, UK; Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
P AmatyaDepartment of Pediatrics, Patan Academy of Health Sciences, Kathmandu, Nepal.
M RabaaCentre for Tropical Medicine and Global Health, Medical Sciences Division, Nuffield Department of Medicine, University of Oxford, Linacre College, Oxford, UK; Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
S DongolOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal.
B BasnyatOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal; Centre for Tropical Medicine and Global Health, Medical Sciences Division, Nuffield Department of Medicine, University of Oxford, Linacre College, Oxford, UK.
S M DixitCenter for Molecular Dynamics Nepal, Kathmandu, Nepal.
S BakerCambridge Institute of Therapeutic Immunology & Infectious Disease, Department of Medicine, University of Cambridge, Cambridge, UK.
A KarkeyOxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal; Centre for Tropical Medicine and Global Health, Medical Sciences Division, Nuffield Department of Medicine, University of Oxford, Linacre College, Oxford, UK. Electronic address: akarkey@oucru.org.
Patan Academy of Health Sciences · NPOxford University Clinical Research Unit · VNCenter for Molecular Dynamics - Nepal · NPUniversity of Cambridge · GBUniversity of Oxford · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundEnterobacter kobei is an emerging cause of outbreak of nosocomial infections in neonatal intensive care units (NICUs). Between July and September 2016, a NICU in a tertiary care hospital of Nepal observed an abrupt increase in the number of neonatal sepsis cases caused by Enterobacter spp. infecting 11 out of 23 admitted neonates, five of whom died of an exacerbated sepsis.

aimTo confirm the suspected outbreak, identify environmental source of infection, and characterize genetic determinants of antimicrobial resistance (AMR) and virulence of the pathogen.

methodsWhole-genome sequencing of all Enterobacter spp. isolated from blood cultures of septic neonates admitted to NICU between May 2016 and December 2017 was performed. Also, an environmental sampling was intensified from fortnightly to weekly during the outbreak.

findingsThe genomic analysis revealed that 10 out of 11 non-duplicated E. kobei isolated from neonatal blood cultures between July and September 2016 were clonal, confirming the outbreak. The isolates carried AMR genes including bla

conclusionOur study underscored the need to implement stringent infection control measures to prevent infection outbreaks. For the first time, we report the emergence of carbapenem and colistin non-susceptible E. kobei carrying mcr-10 gene as a cause of nosocomial neonatal sepsis in a NICU.

Indexed as

Cross InfectionEnterobacteriaceae InfectionsNeonatal SepsisCarbapenemsColistinDisease OutbreaksEnterobacterHumansInfant, NewbornIntensive Care Units, NeonatalMicrobial Sensitivity TestsNepalTertiary Care CentersCarbapenemsColistinColistin-resistanceEnterobacter kobeimcr-10NICUSepsis outbreakWhole-genome sequencing

Identifiers

PMID35460799
PMCPMC7619562
OpenAlexW4224231499

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.