Evidence map›Paper›PMID 35459147›Full record

ArticleJournal of neuroinflammation2022

Synthetic amyloid beta does not induce a robust transcriptional response in innate immune cell culture systems.

I Y Quiroga, A E Cruikshank, M L Bond, K S M Reed, B A Evangelista, J H Tseng, J V Ragusa, R B Meeker, H Won, S Cohen and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of neuroinflammation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Context-dependent regulatory variants in Alzheimer's disease.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Lipopolysaccharides fromJournal of Alzheimer's disease : JAD · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. A coarse-grained molecular dynamics investigation on spontaneous binding of AβComputational and structural biotechnology journal · 2023
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

I Y Quiroga *Thurston Arthritis Research Center, University of North Carolina, Chapel Hill, NC, USA.
A E Cruikshank *Postbaccalaureate Research Education Program, University of North Carolina, Chapel Hill, NC, USA.
M L BondCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, NC, USA.
K S M ReedCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, NC, USA.
B A EvangelistaDepartment of Cell Biology and Physiology, University of North Carolina, Chapel Hill, NC, USA.
J H TsengDepartment of Neurology, University of North Carolina, Chapel Hill, NC, USA.
J V RagusaDepartment of Cell Biology and Physiology, University of North Carolina, Chapel Hill, NC, USA.
R B MeekerDepartment of Neurology, University of North Carolina, Chapel Hill, NC, USA.
H WonDepartment of Genetics and Neuroscience Center, University of North Carolina, Chapel Hill, NC, USA.
S CohenDepartment of Cell Biology and Physiology, University of North Carolina, Chapel Hill, NC, USA.
T J CohenDepartment of Neurology, University of North Carolina, Chapel Hill, NC, USA.
D H PhanstielThurston Arthritis Research Center, University of North Carolina, Chapel Hill, NC, USA. douglas_phanstiel@med.unc.edu.ORCID http://orcid.org/0000-0003-2123-0051
University of North Carolina at Chapel Hill · US

Funding

NRSA in GeneticsT32GM135128 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Daniel J McKay, JEFF J. SEKELSKY · 2020 to 2026
$5.1M
Identifying Alzheimer’s Disease Causal Variants and Target Genes Using iPSC-derived MicrogliaR01AG066871 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COHEN, TODD JONATHAN, PHANSTIEL, DOUGLAS H. · 2020 to 2024
$3.7M
Deciphering Cell-type Specific Regulatory Landscape in Human BrainDP2MH122403 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WON, HYEJUNG · 2019 to 2019
$2.3M
Neural network dysfunction in early HIV neuropathogenesisR01NS108808 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MEEKER, RICK B · 2018 to 2022
$1.9M
Fatty acid trafficking in astrocytes: role of mitochondrial morphology and lipid droplet dynamicsR00AG052570 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COHEN, SARAH · 2018 to 2020
$747k
A degradomics strategy for the analysis of inflammation-associated neuronal vulnerabilityR21AG056924 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MEEKER, RICK B · 2017 to 2018
$428k
NIA NIH HHS R00 AG052570NIA NIH HHS R00AG052570NIA NIH HHS R01 AG066871NIGMS NIH HHS T32 GM135128NIH HHS NS108808NIH HHS R01AG066871NIH HHS T32GM135128NIMH NIH HHS DP2 MH122403NINDS NIH HHS R01 NS108808
6 · The paper itself

Abstract

backgroundAlzheimer's disease (AD) is a progressive neurodegenerative disease that impacts nearly 400 million people worldwide. The accumulation of amyloid beta (Aβ) in the brain has historically been associated with AD, and recent evidence suggests that neuroinflammation plays a central role in its origin and progression. These observations have given rise to the theory that Aβ is the primary trigger of AD, and induces proinflammatory activation of immune brain cells (i.e., microglia), which culminates in neuronal damage and cognitive decline. To test this hypothesis, many in vitro systems have been established to study Aβ-mediated activation of innate immune cells. Nevertheless, the transcriptional resemblance of these models to the microglia in the AD brain has never been comprehensively studied on a genome-wide scale.

methodsWe used bulk RNA-seq to assess the transcriptional differences between in vitro cell types used to model neuroinflammation in AD, including several established, primary and iPSC-derived immune cell lines (macrophages, microglia and astrocytes) and their similarities to primary cells in the AD brain. We then analyzed the transcriptional response of these innate immune cells to synthetic Aβ or LPS and INFγ.

resultsWe found that human induced pluripotent stem cell (hIPSC)-derived microglia (IMGL) are the in vitro cell model that best resembles primary microglia. Surprisingly, synthetic Aβ does not trigger a robust transcriptional response in any of the cellular models analyzed, despite testing a wide variety of Aβ formulations, concentrations, and treatment conditions. Finally, we found that bacterial LPS and INFγ activate microglia and induce transcriptional changes that resemble many, but not all, aspects of the transcriptomic profiles of disease associated microglia (DAM) present in the AD brain.

conclusionsThese results suggest that synthetic Aβ treatment of innate immune cell cultures does not recapitulate transcriptional profiles observed in microglia from AD brains. In contrast, treating IMGL with LPS and INFγ induces transcriptional changes similar to those observed in microglia detected in AD brains.

Indexed as

Alzheimer DiseaseInduced Pluripotent Stem CellsNeurodegenerative DiseasesAmyloid beta-PeptidesCell Culture TechniquesHumansImmunity, InnateLipopolysaccharidesMicrogliaAmyloid beta-PeptidesLipopolysaccharidesAlzheimer’s diseaseLipopolysaccharideMicrogliaRNA-seq

Identifiers

PMID35459147
PMCPMC9034485
OpenAlexW4226380921

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.