Evidence map›Paper›PMID 35458482›Full record

ArticleViruses2022

Viral Evolution and Immunology of SARS-CoV-2 in a Persistent Infection after Treatment with Rituximab.

Nathalie Van der Moeren, Philippe Selhorst, My Ha, Laura Heireman, Pieter-Jan Van Gaal, Dimitri Breems, Pieter Meysman, Kris Laukens, Walter Verstrepen, Natasja Van Gasse and 3 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Nathalie Van der MoerenLaboratory of Microbiology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Philippe SelhorstDepartment of Biomedical Sciences, Institute of Tropical Medicine Antwerp, 2000 Antwerp, Belgium.ORCID 0000-0002-4488-5790
My HaCentre for Health Economics Research & Modelling Infectious Diseases (CHERMID), Antwerp Centre for Translational Immunology and Virology (ACTIV), Vaccine & Infectious Disease Institute (VAXINFECTIO), Department of Paediatrics, Antwerp University, 2610 Antwerp, Belgium.ORCID 0000-0002-6262-341X
Laura HeiremanLaboratory of Microbiology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Pieter-Jan Van GaalDepartement of Nephrology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Dimitri BreemsDepartment of Haematology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Pieter MeysmanCentre for Health Economics Research & Modelling Infectious Diseases (CHERMID), Antwerp Centre for Translational Immunology and Virology (ACTIV), Vaccine & Infectious Disease Institute (VAXINFECTIO), Department of Paediatrics, Antwerp University, 2610 Antwerp, Belgium.ORCID 0000-0001-5903-633X
Kris LaukensCentre for Health Economics Research & Modelling Infectious Diseases (CHERMID), Antwerp Centre for Translational Immunology and Virology (ACTIV), Vaccine & Infectious Disease Institute (VAXINFECTIO), Department of Paediatrics, Antwerp University, 2610 Antwerp, Belgium.ORCID 0000-0002-8217-2564
Walter VerstrepenLaboratory of Microbiology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Natasja Van GasseLaboratory of Microbiology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Benson OgunjimiCentre for Health Economics Research & Modelling Infectious Diseases (CHERMID), Antwerp Centre for Translational Immunology and Virology (ACTIV), Vaccine & Infectious Disease Institute (VAXINFECTIO), Department of Paediatrics, Antwerp University, 2610 Antwerp, Belgium.
Kevin K ArienDepartment of Biomedical Sciences, Institute of Tropical Medicine Antwerp, 2000 Antwerp, Belgium.
Reinout NaesensLaboratory of Microbiology, Ziekenhuis Netwerk Antwerpen, 2050 Antwerp, Belgium.
Ziekenhuisnetwerk Antwerpen Stuivenberg · BEUniversity of Antwerp · BEInstituut voor Tropische Geneeskunde · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProlonged shedding of SARS-CoV-2 in immunocompromised patients has been described. Furthermore, an accumulation of mutations of the SARS-CoV-2 genome in these patients has been observed.

methodsWe describe the viral evolution, immunologic response and clinical course of a patient with a lymphoma in complete remission who had received therapy with rituximab and remained SARS-CoV-2 RT-qPCR positive for 161 days.

resultsThe patient remained hospitalised for 10 days, after which he fully recovered and remained asymptomatic. A progressive increase in Ct-value, coinciding with a progressive rise in lymphocyte count, was seen from day 137 onward. Culture of a nasopharyngeal swab on day 67 showed growth of SARS-CoV-2. Whole genome sequencing (WGS) demonstrated that the virus belonged to the wildtype SARS-CoV-2 clade 20B/GR, but rapidly accumulated a high number of mutations as well as deletions in the N-terminal domain of its spike protein.

conclusionSARS-CoV-2 persistence in immunocompromised individuals has important clinical implications, but halting immunosuppressive therapy might result in a favourable clinical course. The long-term shedding of viable virus necessitates customized infection prevention measures in these individuals. The observed accelerated accumulation of mutations of the SARS-CoV-2 genome in these patients might facilitate the origin of new VOCs that might subsequently spread in the general community.

Indexed as

COVID-19 Drug TreatmentSARS-CoV-2HumansImmunocompromised HostMalePersistent InfectionRituximabRituximabimmunocompromised hostpersistent infectionSARS-CoV-2variants of concern (voc)viral evolution

Identifiers

PMID35458482
PMCPMC9032773
OpenAlexW4224324806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.