ArticleViruses2022
Nearly 20 Years of Genetic Diversity and Evolution of Porcine Circovirus-like Virus P1 from China.
Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Isolation and complete genome analysis of porcine circovirus-1 associated with reproductive failurein swine: foremost study in India.Archives of microbiology · 2025Article
- Phylogenetic analysis of porcine circovirus 2 and its related viruses.Frontiers in veterinary science · 2025Article
- Frequency and Genetic Analysis of Porcine Circovirus Type 2, Which Circulated between 2014 and 2021 in Jiangsu, China.Animals : an open access journal from MDPI · 2024Article
- Vertical transmission of porcine circovirus-like virus P1 in BALB/c mice.BMC veterinary research · 2023Article
- Article
- Transcriptomic and Proteomic Approaches Reveal the Biological Functions of Two Novel Porcine-Origin Noncoding DNA Molecules.Transboundary and emerging diseases · 2023Article
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Authors and funding
9 authors.
Funding
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Abstract
Porcine circovirus-like virus P1 can infect many kinds of animals and mainly causes postweaning multisystemic wasting syndrome. In China, the genetic diversity, variation, and evolutionary processes of this virus have not been described yet. To improve our knowledge of its genetic diversity, evolution, and gene flow, we performed a bioinformatics analysis using the available nucleotide sequences of the P1 virus; among them, 12 nucleotide sequences were from ten pig farms in Jiangsu Province in this epidemiological survey, and 84 sequences were downloaded from GenBank. The P1 sequences showed a rich composition of AT nucleotides. Analyses of the complete genomic sequences were polymorphic and revealed high haplotype (gene) diversity and nucleotide diversity. A phylogenetic analysis based on the NJ method showed that all P1 virus sequences formed two distinct groups: A and B. High genetic differentiation was observed between strains from groups A and B. The codon usage pattern of P1 was affected by dinucleotide compositions. Dinucleotide UU/CC was overrepresented, and dinucleotide CG was underrepresented. The mean evolutionary rate of the P1 virus was estimated to be 3.64 × 10
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