Evidence map›Paper›PMID 35458424›Full record

ArticleViruses2022

Emergence of Two Distinct SARS-CoV-2 Gamma Variants and the Rapid Spread of P.1-like-II SARS-CoV-2 during the Second Wave of COVID-19 in Santa Catarina, Southern Brazil.

Dayane Azevedo Padilha, Vilmar Benetti Filho, Renato Simões Moreira, Tatiany Aparecida Teixeira Soratto, Guilherme Augusto Maia, Ana Paula Christoff, Fernando Hartmann Barazzetti, Marcos André Schörner, Fernanda Luiza Ferrari, Carolina Leite Martins and 27 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Antibody Response in Healthcare Workers During the SARS-CoV-2 Gamma Variant Outbreak in Manaus, Brazil.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2025
    Observational
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  9. Prerequisite for COVID-19 Prediction: A Review on Factors Affecting the Infection Rate.International journal of environmental research and public health · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors at 8 institutions in 2 countries.

Dayane Azevedo PadilhaUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Vilmar Benetti FilhoUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0003-0309-4877
Renato Simões MoreiraInstituto Federal de Santa Catarina, Lages 88506-400, Brazil.ORCID 0000-0002-4246-8045
Tatiany Aparecida Teixeira SorattoUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-6263-6432
Guilherme Augusto MaiaUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Ana Paula ChristoffBiome-Hub Pesquisa e Desenvolvimento, Florianópolis 88054-700, Brazil.
Fernando Hartmann BarazzettiUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-6409-3021
Marcos André SchörnerUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0002-7303-6050
Fernanda Luiza FerrariUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Carolina Leite MartinsUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Eric Kazuo KawagoeUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Julia Kinetz WachterUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0003-1681-7712
Paula SachetUniversidade de São Paulo, São Paulo 05508-220, Brazil.ORCID 0000-0001-8679-7724
Antuani Rafael BaptistellaUniversidade do Oeste de Santa Catarina, Joaçaba 89600-000, Brazil.
Aline Daiane SchlindweinSecretaria de Estado da Saúde, Florianópolis 88015-130, Brazil.
Bruna Kellet CoelhoLaboratório Central do Estado da Saúde de Santa Catarina, Florianópolis 88010-001, Brazil.ORCID 0000-0001-9674-8942
Sandra Bianchini FernandesLaboratório Central do Estado da Saúde de Santa Catarina, Florianópolis 88010-001, Brazil.
Darcita Buerger RovarisLaboratório Central do Estado da Saúde de Santa Catarina, Florianópolis 88010-001, Brazil.
Marlei Pickler Debiasi Dos AnjosLaboratório Central do Estado da Saúde de Santa Catarina, Florianópolis 88010-001, Brazil.
Fernanda Rosene MeloDiretoria de Vigilância Epidemiológica de Santa Catarina, Florianópolis 88015-130, Brazil.
Bianca BittencourtDiretoria de Vigilância Epidemiológica de Santa Catarina, Florianópolis 88015-130, Brazil.
Sthefani CunhaServiço Nacional de Aprendizagem Industrial, Chapecó 70040-903, Brazil.
Karine Lena MeneghettiServiço Nacional de Aprendizagem Industrial, Chapecó 70040-903, Brazil.
Nestor WendtUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Tâmela Zamboni MadalozUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-8087-6309
Marcus Vinícius Duarte RodriguesUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0002-8948-7489
Doris Sobral Marques SouzaUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-7854-7661
Milene Höehr de MoraesBiome-Hub Pesquisa e Desenvolvimento, Florianópolis 88054-700, Brazil.
Rodrigo de Paula BaptistaUniversity of Georgia, Athens, GA 30602, USA.ORCID 0000-0002-1806-8260
Guilherme Toledo-SilvaUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Guilherme RazzeraUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Edmundo Carlos GrisardUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-8916-8296
Patricia Hermes StocoUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Luiz Felipe Valter de OliveiraBiome-Hub Pesquisa e Desenvolvimento, Florianópolis 88054-700, Brazil.ORCID 0000-0003-4535-0621
Maria Luiza BazzoUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Gislaine FongaroUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.
Glauber WagnerUniversidade Federal de Santa Catarina, Florianópolis 88040-900, Brazil.ORCID 0000-0001-5003-6595
Universidade Federal de Santa Catarina · BRFundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina · BRServiço Nacional de Aprendizagem Industrial · BRInstituto Federal de Educação, Ciência e Tecnologia de Santa Catarina · BRSecretaria da Saúde · BRUniversidade de São Paulo · BRUniversidade do Oeste de Santa Catarina · BRUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The western mesoregion of the state of Santa Catarina (SC), Southern Brazil, was heavily affected as a whole by the COVID-19 pandemic in early 2021. This study aimed to evaluate the dynamics of the SARS-CoV-2 virus spreading patterns in the SC state from March 2020 to April 2021 using genomic surveillance. During this period, there were 23 distinct variants, including Beta and Gamma, among which the Gamma and related lineages were predominant in the second pandemic wave within SC. A regionalization of P.1-like-II in the Western SC region was observed, concomitant to the increase in cases, mortality, and the case fatality rate (CFR) index. This is the first evidence of the regionalization of the SARS-CoV-2 transmission in SC and it highlights the importance of tracking the variants, dispersion, and impact of SARS-CoV-2 on the public health systems.

Indexed as

COVID-19SARS-CoV-2BrazilHumansMutationPandemicsPhylogenySpike Glycoprotein, CoronavirusSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2genomeSARS-CoV-2SARS-CoV-2 P.1 variantsurveillance

Identifiers

PMID35458424
PMCPMC9029728
OpenAlexW4221094305

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.