Evidence map›Paper›PMID 35457227›Full record

ArticleInternational journal of molecular sciences2022

Inhibitory Response to CK II Inhibitor Silmitasertib and CDKs Inhibitor Dinaciclib Is Related to Genetic Differences in Pancreatic Ductal Adenocarcinoma Cell Lines.

Yixuan Ma, Sina Sender, Anett Sekora, Weibo Kong, Peter Bauer, Najim Ameziane, Susann Krake, Mandy Radefeldt, Ruslan Al-Ali, Frank Ulrich Weiss and 5 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Yixuan MaDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.
Sina SenderDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.ORCID 0000-0001-5816-9296
Anett SekoraDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.
Weibo KongDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.
Peter BauerDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.
Najim AmezianeCENTOGENE GmbH, 18057 Rostock, Germany.
Susann KrakeCENTOGENE GmbH, 18057 Rostock, Germany.
Mandy RadefeldtCENTOGENE GmbH, 18057 Rostock, Germany.
Ruslan Al-AliCENTOGENE GmbH, 18057 Rostock, Germany.
Frank Ulrich WeissDepartment of Medicine A, University Medicine, University of Greifswald, 17475 Greifswald, Germany.ORCID 0000-0003-3369-6369
Markus M LerchDepartment of Medicine A, University Medicine, University of Greifswald, 17475 Greifswald, Germany.
Alisha ParveenInstitute for Experimental Surgery, University of Rostock, 18057 Rostock, Germany.
Dietmar ZechnerInstitute for Experimental Surgery, University of Rostock, 18057 Rostock, Germany.ORCID 0000-0002-2075-7540
Christian JunghanssDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.
Hugo Murua EscobarDepartment of Medicine Clinic III, Hematology, Oncology and Palliative Medicine, Rostock University Medical Center, 18057 Rostock, Germany.ORCID 0000-0001-7123-7986
University of Rostock · DECentogene (Germany) · DEUniversitätsmedizin Greifswald · DEResearch Institute for Farm Animal Biology (FBN) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Casein kinase II (CK2) and cyclin-dependent kinases (CDKs) frequently interact within multiple pathways in pancreatic ductal adenocarcinoma (PDAC). Application of CK2- and CDK-inhibitors have been considered as a therapeutic option, but are currently not part of routine chemotherapy regimens. We investigated ten PDAC cell lines exposed to increasing concentrations of silmitasertib and dinaciclib. Cell proliferation, metabolic activity, biomass, and apoptosis/necrosis were evaluated, and bioinformatic clustering was used to classify cell lines into sensitive groups based on their response to inhibitors. Furthermore, whole exome sequencing (WES) and RNA sequencing (RNA-Seq) was conducted to assess recurrent mutations and the expression profile of inhibitor targets and genes frequently mutated in PDAC, respectively. Dinaciclib and silmitasertib demonstrated pronounced and limited cell line specific effects in cell death induction, respectively. WES revealed no genomic variants causing changes in the primary structure of the corresponding inhibitor target proteins. RNA-Seq demonstrated that the expression of all inhibitor target genes was higher in the PDAC cell lines compared to non-neoplastic pancreatic tissue. The observed differences in PDAC cell line sensitivity to silmitasertib or dinaciclib did not depend on target gene expression or the identified gene variants. For the PDAC hotspot genes kirsten rat sarcoma virus (

Indexed as

Carcinoma, Pancreatic DuctalPancreatic NeoplasmsCasein Kinase IICell LineCell Line, TumorCell ProliferationCyclic N-OxidesHumansIndolizinesNaphthyridinesPhenazinesProtein Kinase InhibitorsProto-Oncogene Proteins p21(ras)Pyridinium CompoundsCasein Kinase IICyclic N-OxidesdinaciclibIndolizinesNaphthyridinesPhenazinesProtein Kinase InhibitorsProto-Oncogene Proteins p21(ras)Pyridinium Compoundssilmitasertibcasein kinase IIcyclin dependent kinaseKRASpancreatic ductal adenocarcinomaTP53

Identifiers

PMID35457227
PMCPMC9031017
OpenAlexW4224128004

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.