Evidence map›Paper›PMID 35457164›Full record

ArticleInternational journal of molecular sciences2022

Quality Control of Bacterial Extracellular Vesicles with Total Protein Content Assay, Nanoparticles Tracking Analysis, and Capillary Electrophoresis.

Aleksandra Steć, Joanna Jońca, Krzysztof Waleron, Małgorzata Waleron, Agata Płoska, Leszek Kalinowski, Bartosz Wielgomas, Szymon Dziomba

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Exosome-Based Therapeutics in Dermatology.Biomaterials research · 2025
    Review
  6. Review
  7. Loss of Lipooligosaccharide Synthesis inInternational journal of molecular sciences · 2024
    Article
  8. Membrane Vesicles of Clostridioides difficile and Other Clostridial Species.Advances in experimental medicine and biology · 2024
    Article
  9. Review
  10. Article
  11. Extracellular Vesicles in Microbes, Pathogens, and Infectious Diseases.International journal of molecular sciences · 2023
    Article
  12. Review
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Aleksandra StećDepartment of Toxicology, Faculty of Pharmacy, Medical University of Gdansk, 107 Hallera Street, 80-416 Gdansk, Poland.ORCID 0000-0002-8081-8093
Joanna JońcaDepartment of Pharmaceutical Microbiology, Faculty of Pharmacy, Medical University of Gdansk, 107 Hallera Street, 80-416 Gdansk, Poland.
Krzysztof WaleronDepartment of Pharmaceutical Microbiology, Faculty of Pharmacy, Medical University of Gdansk, 107 Hallera Street, 80-416 Gdansk, Poland.ORCID 0000-0002-9989-0984
Małgorzata WaleronLaboratory of Plant Protection and Biotechnology, Intercollegiate Faculty of Biotechnology UG and MUG, 58 Abrahama Street, 80-307 Gdansk, Poland.ORCID 0000-0001-6789-2881
Agata PłoskaDepartment of Medical Laboratory Diagnostics-Fahrenheit Biobank BBMRI.pl, Faculty of Pharmacy, Medical University of Gdansk, 7 Debinki Street, 80-211 Gdansk, Poland.ORCID 0000-0002-0408-5262
Leszek KalinowskiDepartment of Medical Laboratory Diagnostics-Fahrenheit Biobank BBMRI.pl, Faculty of Pharmacy, Medical University of Gdansk, 7 Debinki Street, 80-211 Gdansk, Poland.ORCID 0000-0001-7270-1592
Bartosz WielgomasDepartment of Toxicology, Faculty of Pharmacy, Medical University of Gdansk, 107 Hallera Street, 80-416 Gdansk, Poland.ORCID 0000-0003-4245-9197
Szymon DziombaDepartment of Toxicology, Faculty of Pharmacy, Medical University of Gdansk, 107 Hallera Street, 80-416 Gdansk, Poland.ORCID 0000-0002-0560-8256
Gdańsk Medical University · PLGdańsk University of Technology · PLUniversity of Gdańsk · PL

Funding

Ministry of Science and Higher Education 01-0500/08/643Ministry of Science and Higher Education 10/E-389/SPUB/SP/2020Ministry of Science and Higher Education 664/514/61/71-1204National Science Center 2019/35/B/NZ9/01973
6 · The paper itself

Abstract

Extracellular vesicles (EVs) were isolated from Pectobacterium zantedeschiae culturing media using direct ultracentrifugation (UC), iodixanol cushion ultracentrifugation (ICUC), and iodixanol density gradient ultracentrifugation (IDGUC) techniques. The isolates were characterized with total protein content assay (bicinchoninic acid assay, BCA), nanoparticles tracking analysis (NTA), and capillary electrophoresis (CE). A satisfactory correlation (R2 > 0.94) between quantitative results obtained with BCA, NTA and CE was achieved only for isolates obtained with the IDGUC. The correlation between protein content and CE was proved to be related to the isolates’ purity. The NTA was found unable to provide reliable information on EVs quantity in samples isolated with UC and ICUC, due to the co-isolated particulate impurities. Moreover, the work reports polysaccharides, used as culturing media components, as a potential source of bias of quantitation with total protein content assay and NTA. The study demonstrates the advantageous selectivity of CE in quality control of EVs and its ability to differentiate subpopulations of EVs of Pectobacterium.

Indexed as

Extracellular VesiclesNanoparticlesElectrophoresis, CapillaryQuality ControlUltracentrifugationelectrophoresisextracellular vesiclesPectobacteriumpuritysubpopulationsultracentrifugation

Identifiers

PMID35457164
PMCPMC9028362
OpenAlexW4224114413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.