Evidence map›Paper›PMID 35456515›Full record

ReviewGenes2022

Methodologies for the

Jessica M Storer, Robert Hubley, Jeb Rosen, Arian F A Smit

Abstract readReview
In one paragraph

Review in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
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  11. Article
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  13. Article
  14. Study of Dispersed Repeats in theInternational journal of molecular sciences · 2024
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jessica M StorerInstitute for Systems Biology, Seattle, WA 98109, USA.
Robert HubleyInstitute for Systems Biology, Seattle, WA 98109, USA.ORCID 0000-0001-9261-3821
Jeb RosenInstitute for Systems Biology, Seattle, WA 98109, USA.
Arian F A SmitInstitute for Systems Biology, Seattle, WA 98109, USA.

Funding

Maintenance and Development of RepeatMasker and RepeatModelerR01HG002939 · NHGRI · INSTITUTE FOR SYSTEMS BIOLOGY · PI Robert MacDonald Hubley, Arian Fredericus Anthonius Smit · 2003 to 2026
$9.1M
Dfam: sustainable growth, curation support, and improved quality for mobile element annotationU24HG010136 · NHGRI · INSTITUTE FOR SYSTEMS BIOLOGY · PI Robert MacDonald Hubley, Arian Fredericus Anthonius Smit · 2018 to 2026
$5.2M
NHGRI NIH HHS R01 HG002939NHGRI NIH HHS RO1 HG002939NHGRI NIH HHS U24 HG010136
6 · The paper itself

Abstract

The discovery and characterization of transposable element (TE) families are crucial tasks in the process of genome annotation. Careful curation of TE libraries for each organism is necessary as each has been exposed to a unique and often complex set of TE families.

Indexed as

DNA Transposable ElementsDNA Transposable Elementscurationde novo methodsgenome annotationrepeatssignature-based methodstransposable elementtransposon

Identifiers

PMID35456515
PMCPMC9025800

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.