Evidence map›Paper›PMID 35454290›Full record

ArticleAnimals : an open access journal from MDPI2022

Frequency of an X-Linked Maternal Variant of the Bovine

Md Shafiqul Islam, Mitsuhiro Takagi, Keun-Woo Lee, Hye-Sook Chang, Hiroaki Okawa, Muchammad Yunus, Tita Damayanti Lestari, Martia Rani Tacharina, Shahnaj Pervin, Tofazzal Md Rakib and 2 more

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. The High Frequency of a G-Allele Variant of theAnimals : an open access journal from MDPI · 2025
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Md Shafiqul IslamLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.ORCID 0000-0003-2248-917X
Mitsuhiro TakagiLaboratory of Theriogenology, Joint Faculty of Veterinary Medicine, Yamaguchi University, 1677-1 Yoshida, Yamaguchi 753-8511, Japan.
Keun-Woo LeeDepartment of Veterinary Internal Medicine, College of Veterinary Medicine, Kyungpook National University, 80, Daehak-ro, Buk-gu, Daegu 41566, North Gyeongsang, Korea.
Hye-Sook ChangLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.
Hiroaki OkawaGuardian Co., Ltd., 2794-127 Nishi-Beppu-cho, Kagoshima 890-0033, Japan.
Muchammad YunusFaculty of Veterinary Medicine, Airlangga University, Campus C, Mulyorejo, Surabaya 60115, Indonesia.
Tita Damayanti LestariFaculty of Veterinary Medicine, Airlangga University, Campus C, Mulyorejo, Surabaya 60115, Indonesia.
Martia Rani TacharinaFaculty of Veterinary Medicine, Airlangga University, Campus C, Mulyorejo, Surabaya 60115, Indonesia.
Shahnaj PervinLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.
Tofazzal Md RakibLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.ORCID 0000-0003-2642-9908
Akira YabukiLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.ORCID 0000-0002-6418-5169
Osamu YamatoLaboratory of Clinical Pathology, Joint Faculty of Veterinary Medicine, Kagoshima University, 1-21-24 Korimoto, Kagoshima 890-0065, Japan.ORCID 0000-0002-4430-5645
Kagoshima University · JPAirlangga University · IDKyungpook National University · KRYamaguchi University · JP

Funding

Ito Foundation H31-KEN3Ito Foundation R2-KEN70Japan Racing Association R3-no. 18Ministry of Education, Culture, Sports, Science and Technology 17H03927
6 · The paper itself

Abstract

Immune adaptation plays an essential role in determining pregnancy, which has been shown to be dependent on sufficient immunological tolerance mediated by FOXP3+ regulatory T cells. Recently, an X-linked maternal single-nucleotide polymorphism (SNP), located 2175 base pairs upstream of the start codon in the bovine FOXP3 gene (NC_037357.1: g.87298881A>G, rs135720414), was identified in Japanese Black (JB: Bos taurus) cows in association with recurrent infertility. However, with the exception of JB cows, the frequency of this SNP has yet to be studied in other cow populations. In this study, we thus aimed to evaluate the frequency of this SNP in different cow breeds. Between 2018 and 2021, a total of 809 DNA samples were obtained from 581 JB, 73 Holstein Friesian (HF: B. taurus), 125 Korean Hanwoo (KH: B. taurus coreanae), and 30 Indonesian Madura (IM: a crossbreed between B. indicus and B. javanicus) cows, which were genotyped using a TaqMan probe-based real-time polymerase chain reaction assay designed in this study. The frequency of the G allele was found to be relatively high in local IM (0.700), moderate in dairy HF (0.466), and low in beef JB (0.250) and KH (0.112) cows, with differences in the frequencies between each group being shown to be statistically significant (p < 0.005) using Fisher’s exact test. The results obtained in this study indicate that the G allele frequencies of the identified the SNP differ markedly in different breeds of taurine and indicine cattle. Given these findings, it would thus be important to evaluate the relationships between high frequencies of the G allele and infertility in different breeds.

Indexed as

allele frequencybovine FOXP3 genecowHanwooHolstein FriesianinfertilityJapanese blackMaduraregulatory T cell

Identifiers

PMID35454290
PMCPMC9030747
OpenAlexW4223920345

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.