ArticleMethods in molecular biology (Clifton, N.J.)2022
Incorporation of Trait-Specific Genetic Information into Genomic Prediction Models.
Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
1 citing paper in PubMed, 2 citations in OpenAlex.
- Exploration of genotype-by-environment interactions affecting gene expression responses in porcine immune cells.Frontiers in genetics · 2023Article
Corrections and comments
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Authors and funding
5 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Due to the rapid development of high-throughput sequencing technology, we can easily obtain not only the genetic variants at the whole-genome sequence level (e.g., from 1000 Genomes project and 1000 Bull Genomes project), but also a wide range of functional annotations (e.g., enhancers and promoters from ENCODE, FAANG, and FarmGTEx projects) across a wide range of tissues, cell types, developmental stages, and environmental conditions. This huge amount of information leads to a revolution in studying genetics and genomics of complex traits in humans, livestock, and plant species. In this chapter, we focused on and reviewed the genomic prediction methods that incorporate external biological information into genomic prediction, such as sequence ontology, linkage disequilibrium (LD) of SNPs, quantitative trait loci (QTL), and multi-layer omics data (e.g., transcriptome, epigenome, and microbiome).
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.