Evidence map›Paper›PMID 35451473›Full record

ArticleDevelopment (Cambridge, England)2022

Revisiting the role of Notch in nephron segmentation confirms a role for proximal fate selection during mouse and human nephrogenesis.

Kathryn Duvall, Lauren Crist, Alison J Perl, Naomi Pode Shakked, Praneet Chaturvedi, Raphael Kopan

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. A single-cell multiomic analysis of kidney organoid differentiation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Principles of human and mouse nephron development.Nature reviews. Nephrology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Kathryn DuvallDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.
Lauren CristDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.ORCID 0000-0002-5703-2420
Alison J PerlDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.ORCID 0000-0002-1797-2055
Naomi Pode ShakkedDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.ORCID 0000-0001-9179-6355
Praneet ChaturvediDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.
Raphael KopanDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH 45229, USA.ORCID 0000-0002-0350-2730
Cincinnati Children's Hospital Medical Center · US

Funding

The Mechanism Regulating Renal Progenitor AgingR01DK106225 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI KOPAN, RAPHAEL · 2016 to 2020
$2.3M
SH800 Cell SorterS10OD023410 · OD · CINCINNATI CHILDRENS HOSP MED CTR · PI THORNTON, SHERRY L · 2017 to 2017
$318k
Identification of the genetic mechanisms governing mammalian nephron endowmentF30DK123841 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI JARMAS, ALISON · 2019 to 2022
$178k
NIDDK NIH HHS F30 DK123841NIDDK NIH HHS R01 DK106225NIH HHS S10 OD023410
6 · The paper itself

Abstract

Notch signaling promotes maturation of nephron epithelia, but its proposed contribution to nephron segmentation into proximal and distal domains has been called into doubt. We leveraged single cell and bulk RNA-seq, quantitative immunofluorescent lineage/fate tracing, and genetically modified human induced pluripotent stem cells (iPSCs) to revisit this question in developing mouse kidneys and human kidney organoids. We confirmed that Notch signaling is needed for maturation of all nephron lineages, and thus mature lineage markers fail to detect a fate bias. By contrast, early markers identified a distal fate bias in cells lacking Notch2, and a concomitant increase in early proximal and podocyte fates in cells expressing hyperactive Notch1 was observed. Orthogonal support for a conserved role for Notch signaling in the distal/proximal axis segmentation is provided by the demonstration that nicastrin (NCSTN)-deficient human iPSC-derived organoids differentiate into TFA2B+ distal tubule and CDH1+ connecting segment progenitors, but not into HNF4A+ or LTL+ proximal progenitors.

Indexed as

Gene Expression Regulation, DevelopmentalInduced Pluripotent Stem CellsAnimalsCell DifferentiationHumansKidneyMiceNephronsOrganogenesisReceptors, NotchReceptors, NotchDevelopmentKidneyNephronNotchProximal tubuleSegmentation

Identifiers

PMID35451473
PMCPMC9188758
OpenAlexW4224289309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.