Evidence map›Paper›PMID 35451361›Full record

ArticleEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin2022

Genomic and epidemiological report of the recombinant XJ lineage SARS-CoV-2 variant, detected in northern Finland, January 2022.

Erika Lindh, Teemu Smura, Soile Blomqvist, Kirsi Liitsola, Hanna Vauhkonen, Laura Savolainen, Jaana Ikonen, Jukka Ronkainen, Jyri Taskila, Tea Taskila and 4 more

Abstract read
In one paragraph

Article in Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Erika LindhDepartment of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.
Teemu SmuraDepartment of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Soile BlomqvistDepartment of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.
Kirsi LiitsolaDepartment of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.
Hanna VauhkonenDepartment of Virology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Laura SavolainenNorthern Finland Laboratory Center Nordlab, Oulu, Finland.
Jaana IkonenNorthern Finland Laboratory Center, Nordlab, Länsi-Pohja, Finland.
Jukka RonkainenPrimary Health Care Center City of Tornio, Finland and Center for Life Course Health Research, University of Oulu, Finland.
Jyri TaskilaLänsi-Pohja Health Care District, Kemi, Finland.
Tea TaskilaPrimary Health Care Center City of Kemi, Kemi, Finland.
Pertti SakaranahoMunicipality of Keminmaa, Keminmaa, Finland.
Carita Savolainen-KopraDepartment of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.
Olli VapalahtiDepartment of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.
Niina IkonenDepartment of Health Security, Finnish Institute for Health and Welfare (THL), Helsinki, Finland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recombinant sequences of the SARS-CoV-2 Omicron variant were detected in surveillance samples collected in north-western Finland in January 2022. We detected 191 samples with an identical genome arrangement in weeks 3 to 11, indicating sustained community transmission. The recombinant lineage has a 5'-end of BA.1, a recombination breakpoint between

Indexed as

COVID-19SARS-CoV-2FinlandGenomicsHumansomicronrecombinantSARS-CoV-2variantXJ-lineage

Identifiers

PMID35451361
PMCPMC9027151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.