Evidence map›Paper›PMID 35450884›Full record

ArticleGenes & development2022

CHD4 is recruited by GATA4 and NKX2-5 to repress noncardiac gene programs in the developing heart.

Zachary L Robbe, Wei Shi, Lauren K Wasson, Angel P Scialdone, Caralynn M Wilczewski, Xinlei Sheng, Austin J Hepperla, Brynn N Akerberg, William T Pu, Ileana M Cristea and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Role of CHD chromatin remodelers in heart development.World journal of pediatrics : WJP · 2026
    Review
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  8. Human mutation · 2026
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  17. How does CHD4 slide nucleosomes?Biochemical Society transactions · 2024
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Zachary L Robbe *Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Wei Shi *Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Lauren K WassonDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.ORCID 0000-0002-5193-5215
Angel P ScialdoneDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Caralynn M WilczewskiDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Xinlei ShengDepartment of Molecular Biology, Princeton University, Princeton, New Jersey 08544, USA.
Austin J HepperlaLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Brynn N AkerbergDepartment of Cardiology, Boston Children's Hospital, Boston, Massachusetts 02115, USA.
William T PuDepartment of Cardiology, Boston Children's Hospital, Boston, Massachusetts 02115, USA.
Ileana M CristeaDepartment of Molecular Biology, Princeton University, Princeton, New Jersey 08544, USA.
Ian J DavisLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
Frank L ConlonDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
University of North Carolina at Chapel Hill · USBoston Children's Hospital · USPrinceton University · US

Funding

Regulation of Cardiac Development in Health and DiseaseUM1HL098166 · NHLBI · HARVARD MEDICAL SCHOOL · PI PENNACCHIO, LEN ALEXANDER, PU, WILLIAM TSWENCHING · 2015 to 2019
$4.4M
Cardiac interaction networks as determinants of transcriptional specificityR01HD089275 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO, CRISTEA, ILEANA M. · 2017 to 2021
$2.9M
Function and regulation of chromatin remodeling complexes in cardiac development and diseaseR01HL165785 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO, SHPARGEL, KARL BRYAN · 2022 to 2025
$2.3M
Mechanism and Function of Cardiac Transcriptional Repression NetworksR01HL156424 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CONLON, FRANK LEO · 2021 to 2024
$2.1M
NHLBI NIH HHS R01 HL156424NHLBI NIH HHS UM1 HL098166NICHD NIH HHS R01 HD089275
6 · The paper itself

Abstract

The nucleosome remodeling and deacetylase (NuRD) complex is one of the central chromatin remodeling complexes that mediates gene repression. NuRD is essential for numerous developmental events, including heart development. Clinical and genetic studies have provided direct evidence for the role of chromodomain helicase DNA-binding protein 4 (CHD4), the catalytic component of NuRD, in congenital heart disease (CHD), including atrial and ventricular septal defects. Furthermore, it has been demonstrated that CHD4 is essential for mammalian cardiomyocyte formation and function. A key unresolved question is how CHD4/NuRD is localized to specific cardiac target genes, as neither CHD4 nor NuRD can directly bind DNA. Here, we coupled a bioinformatics-based approach with mass spectrometry analyses to demonstrate that CHD4 interacts with the core cardiac transcription factors GATA4, NKX2-5, and TBX5 during embryonic heart development. Using transcriptomics and genome-wide occupancy data, we characterized the genomic landscape of GATA4, NKX2-5, and TBX5 repression and defined the direct cardiac gene targets of the GATA4-CHD4, NKX2-5-CHD4, and TBX5-CHD4 complexes. These data were used to identify putative

Indexed as

DNA HelicasesMi-2 Nucleosome Remodeling and Deacetylase ComplexAnimalsGenes, HomeoboxMammalsMyocytes, CardiacNucleosomesTranscription FactorsDNA HelicasesMi-2 Nucleosome Remodeling and Deacetylase ComplexNucleosomesTranscription FactorscardiacCHD4chromatin remodelingNuRDrecruitment

Identifiers

PMID35450884
PMCPMC9067406
OpenAlexW4224230881

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.