Evidence map›Paper›PMID 35449764›Full record

ArticleComputing in cardiology2021

Uncertainty Quantification in Simulations of Myocardial Ischemia.

Jake A Bergquist, Brian Zenger, Lindsay C Rupp, Akil Narayan, Jess Tate, Rob S MacLeod

Open access · greenAbstract read
In one paragraph

Article in Computing in cardiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jake A BergquistScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
Brian ZengerScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
Lindsay C RuppScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
Akil NarayanScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
Jess TateScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
Rob S MacLeodScientific Computing and Imaging Institute, University of Utah, SLC, UT, USA.
University of Utah · US

Funding

TRD - VisualizationP41GM103545 · NIGMS · UNIVERSITY OF UTAH · PI JOHNSON, CHRISTOPHER R., MACLEOD, ROB S. · 2012 to 2019
$9.7M
Center for Integrative Biomedical Computing Legacy TransitionR24GM136986 · NIGMS · UNIVERSITY OF UTAH · PI JOHNSON, CHRISTOPHER R., MACLEOD, ROB S. · 2020 to 2022
$1.6M
Integration of Uncertainty Quantification with SCIRun Bioelectric Field Simulation PipelineU24EB029012 · NIBIB · UNIVERSITY OF UTAH · PI MACLEOD, ROB S. · 2019 to 2021
$1.1M
NIBIB NIH HHS U24 EB029012NIGMS NIH HHS P41 GM103545NIGMS NIH HHS R24 GM136986
6 · The paper itself

Abstract

Computational models of myocardial ischemia are parameterized using assumptions of tissue properties and physiological values such as conductivity ratios in cardiac tissue and conductivity changes between healthy and ischemic tissues. Understanding the effect of uncertainty in these parameter selections would provide useful insight into the performance and variability of the modeling outputs. Recently developed uncertainty quantification tools allow for the application of polynomial chaos expansion uncertainty quantification to such bioelectric models in order to parsimoniously examine model response to input uncertainty. We applied uncertainty quantification to examine reconstructed extracellular potentials from the cardiac passive bidomain based on variation in the conductivity values for the ischemic tissue. We investigated the model response in both a synthetic dataset with simulated ischemic regions and a dataset with ischemic regions derived from experimental recordings. We found that extracellular longitudinal and intracellular longitudinal conductivities predominately affected simulation output, with the highest standard deviations in regions of extracellular potential elevations. We found that transverse conductivity had almost no effect on model output.

Identifiers

PMID35449764
PMCPMC9019765
OpenAlexW4206711519

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.