Evidence map›Paper›PMID 35449187›Full record

SynthesisCommunications biology2022

Genome-wide association study of actinic keratosis identifies new susceptibility loci implicated in pigmentation and immune regulation pathways.

Yuhree Kim, Jie Yin, Hailiang Huang, Eric Jorgenson, Hélène Choquet, Maryam M Asgari

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Assessment of the Influence of UVR in Cutaneous Melanoma.Photodermatology, photoimmunology & photomedicine · 2025
    Review
  8. Article
  9. Article
  10. Regulation of MAPK Signaling Pathways by the Large HERC Ubiquitin Ligases.International journal of molecular sciences · 2023
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yuhree KimDepartment of Dermatology, Massachusetts General Hospital, Boston, MA, USA.ORCID 0000-0001-8266-6241
Jie YinDivision of Research, Kaiser Permanente Northern California, Oakland, CA, USA.
Hailiang HuangAnalytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
Eric JorgensonRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-5829-8191
Hélène ChoquetDivision of Research, Kaiser Permanente Northern California, Oakland, CA, USA. Helene.Choquet@kp.org.ORCID 0000-0001-9839-8667
Maryam M AsgariDepartment of Dermatology, Massachusetts General Hospital, Boston, MA, USA. pores@mgh.harvard.edu.
Harvard University · USKaiser Permanente · USRegeneron (United States) · US

Funding

A Resource for Genetic Epidemiology Research in Adult Health and AgingRC2AG036607 · NIA · KAISER FOUNDATION RESEARCH INSTITUTE · PI RISCH, NEIL J., SCHAEFER, CATHERINE ANN · 2009 to 2010
$24.8M
Patient-oriented research and mentoring program in dermatologic diseasesK24AR069760 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI ASGARI, MARYAM MANDANA · 2017 to 2025
$1.9M
The Role of Genetic Risk Factors in Keratinocyte Carcinoma SusceptibilityR01CA241623 · NCI · KAISER FOUNDATION RESEARCH INSTITUTE · PI ASGARI, MARYAM MANDANA, CHOQUET, HELENE · 2020 to 2025
$1.7M
PQ3 Cutaneous squamous cell carcinoma: Integrating germline and somatic alterations that underlie tumor progressionR01CA231264 · NCI · UNIVERSITY OF COLORADO DENVER · PI ASGARI, MARYAM MANDANA · 2019 to 2023
$1.5M
NCI NIH HHS R01 CA231264NCI NIH HHS R01 CA241623NIAMS NIH HHS K24 AR069760NIA NIH HHS RC2 AG036607
6 · The paper itself

Abstract

Actinic keratosis (AK) is a common precancerous cutaneous neoplasm that arises on chronically sun-exposed skin. AK susceptibility has a moderate genetic component, and although a few susceptibility loci have been identified, including IRF4, TYR, and MC1R, additional loci have yet to be discovered. We conducted a genome-wide association study of AK in non-Hispanic white participants of the Genetic Epidemiology Research on Adult Health and Aging (GERA) cohort (n = 63,110, discovery cohort), with validation in the Mass-General Brigham (MGB) Biobank cohort (n = 29,130). We identified eleven loci (P < 5 × 10

Indexed as

Keratosis, ActinicSkin NeoplasmsAdultForkhead Transcription FactorsGenetic Predisposition to DiseaseGenome-Wide Association StudyHeterogeneous-Nuclear Ribonucleoprotein Group CHumansPolymorphism, Single NucleotideRepressor ProteinsForkhead Transcription FactorsFOXP1 protein, humanHeterogeneous-Nuclear Ribonucleoprotein Group CRALY protein, humanRepressor ProteinsTRPS1 protein, human

Identifiers

PMID35449187
PMCPMC9023580
OpenAlexW4224216320

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.