Evidence map›Paper›PMID 35449073›Full record

ArticleJournal of experimental & clinical cancer research : CR2022

Identification of RNA-splicing factor Lsm12 as a novel tumor-associated gene and a potent biomarker in Oral Squamous Cell Carcinoma (OSCC).

Yan Dong, Liyan Xue, Yan Zhang, Caiyun Liu, Yanguang Zhang, Na Jiang, Xiaoyan Ma, Fangyu Chen, Lingxia Li, Liyuan Yu and 13 more

Open access · goldAbstract read
In one paragraph

Article in Journal of experimental & clinical cancer research : CR, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 4 institutions in 1 country.

Yan Dong *College of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Liyan Xue *Department of Pathology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China.
Yan ZhangCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Caiyun LiuHospital of Stomatology, Dalian Medical University, Dalian, 116027, Liaoning, China.
Yanguang ZhangCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Na JiangCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Xiaoyan MaCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Fangyu ChenCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Lingxia LiCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Liyuan YuCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Xuefeng LiuInstitute of Cancer Stem Cell, Dalian Medical University, Dalian, 116044, Liaoning, China.
Shujuan ShaoLiaoning Key Laboratory of Proteomics, Dalian Medical University, Dalian, 116044, Liaoning, China.
Shufang GuanCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Jian ZhangCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Qingchun XiaoCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Hui LiCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Ailing DongCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Lijie HuangState Key Laboratory of Molecular Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China.
Chenyang ShiCollege of Stomatology, Dalian Medical University, Dalian, 116044, Liaoning, China.
Yan WangKey Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Laboratory of Molecular Oncology, Peking University Cancer Hospital & Institute, Beijing, 100142, China.
Ming FuState Key Laboratory of Molecular Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China.
Ning LvDepartment of Pathology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100021, China. lvning@cicams.ac.cn.
Qimin ZhanKey Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Laboratory of Molecular Oncology, Peking University Cancer Hospital & Institute, Beijing, 100142, China. zhanqimin@bjmu.edu.cn.
Dalian Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNPeking University Cancer Hospital · CNPeking University · CN

Funding

Basic Scientific Research Projects of Colleges and Universities of Liaoning Province LF2017012National Natural Science Foundation of China 81830086National Natural Science Foundation of China 81988101Natural Science Foundation of Liaoning Province 20170540247
6 · The paper itself

Abstract

backgroundOral squamous cell carcinoma (OSCC) is one of the common cancers worldwide. The lack of specific biomarkers and therapeutic targets leads to delayed diagnosis and hence the poor prognosis of OSCC patients. Thus, it is urgent to identify effective biomarkers and therapeutic targets for OSCC.

methodsWe established the golden hamster carcinogenic model of OSCC induced by 7,12-dimethylbenz(a) anthrancene (DMBA) and used mRNA microarrays to detect the differentially expressed genes (DEGs). DEGs were validated in OSCC clinical tissue microarrays using immunohistochemistry method. Whole transcriptome sequencing was performed to obtain an overview of biological functions of Lsm12. PCR assay and sequencing were employed to investigate the alternative splicing of genes regulated by Lsm12. Cell proliferation, colony formation, Transwell migration and invasion assay and in vivo tumor formation assay were performed to investigate the roles of Lsm12 and two transcript variants of USO1 in OSCC cells.

resultsLsm12 was identified to be significantly up-regulated in the animal model of OSCC tumorigenesis, which was validated in the clinical OSCC samples. In the paired normal tissues, Lsm12 staining was negative (91%, 92/101) or weak, while in OSCC tissues, positive rate is 100% and strong staining spread over the whole tissues in 93 (93/101, 92%) cases. Lsm12 overexpression significantly promoted OSCC cell growth, colony formation, migration and invasion abilities, while Lsm12 knockdown showed the opposite trends on these phenotypes and obviously inhibited the tumor formation in vivo. Furthermore, Lsm12 overexpression caused the inclusion of USO1 exon 15 and Lsm12 knockdown induced exon 15 skipping. Exon 15-retained USO1 significantly promoted the malignant phenotypes of OSCC cells when compared with the exon 15-deleted USO1.

conclusionsWe identified Lsm12, a novel tumorigenesis-related gene, as an important regulator involved in OSCC tumorigenesis. Lsm12 is a novel RNA-splicing related gene and can regulate the alternative splicing of USO1 exon 15 which was associated closely with OSCC carcinogenesis. Our findings thus provide that Lsm12 might be a potent biomarker and potential therapeutic target for OSCC.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMouth NeoplasmsAnimalsBiomarkersCarcinogenesisCell Line, TumorCell MovementCell ProliferationGene Expression Regulation, NeoplasticHumansRNARNA Splicing FactorsSquamous Cell Carcinoma of Head and NeckBiomarkersRNARNA Splicing FactorsAlternative splicingLsm12Novel biomarkerOSCCUSO1 exon 15

Identifiers

PMID35449073
PMCPMC9027881
OpenAlexW4224264393

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.