Evidence map›Paper›PMID 35446856›Full record

ArticlePloS one2022

Evaluation of gene expression of PLEKHS1, AADAC, and CDKN3 as novel genomic markers in gastric carcinoma.

Marwa Sayed Abdel-Tawab, Hanan Fouad, Asmaa M Othman, Ragaey A Eid, Marwa Abdeltawab Mohammed, Ahmed Hassan, Hoda Ramadan Reyad

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Marwa Sayed Abdel-TawabMedical Biochemistry Department, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.ORCID 0000-0001-5776-4923
Hanan FouadDepartment of Medical Biochemistry, Faculty of Medicine, Cairo University, Giza, Egypt.
Asmaa M OthmanDepartment of Internal Medicine, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.
Ragaey A EidDepartment of Tropical Medicine (Department of Gastroenterology, Hepatology and Endemic Medicine), Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.ORCID 0000-0002-3077-8265
Marwa Abdeltawab MohammedMedical Physiology Department, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.
Ahmed HassanClinical Oncology Department, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.
Hoda Ramadan ReyadMedical Biochemistry Department, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.
Beni-Suef University · EGSuez University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gastric cancer (GC) is considered lethal aggressive cancer. In Egypt, GC has a low incidence but unfortunately, it is mostly diagnosed at an advanced stage with a poor prognosis. Assessment of novel markers that can be used in the early detection of GC is an urgent need. The present study was performed to assess the association of the Pleckstrin homology domain-containing S1 (PLEKHS1)، arylacetamide deacetylase (AADAC, and Cyclin-dependent kinase inhibitor 3 (CDKN3) genes with GC and to correlate their gene expression levels with tumor stage, grade, and other clinicopathological features. The current work was performed on forty gastric tissue samples; twenty in Group 1 with GC tissues at different stages, and grades and twenty in Group 2 (control group) with non-tumorous tissue. PLEKHS1, AADAC, and CDKN3 gene expression were assessed by RT-qPCR. AADAC, CDKN3 genes were significantly (p<0.001) upregulated, while PLEKHS1 gene was significantly (p<0.001) downregulated in the GC group than the control group. AADAC gene expression exhibited a high significant (p<0.001) positive correlation with the tumor grades and the tumor stages. A high significant negative correlation between AADAC, and CDKN3 gene expression (r = -.760, p<0.001) was found. The three studied parameters showed high significant sensitivity and specificity in the prediction of the presence of GC. PLEKHS1, AADAC, and CDKN3 gene expressions were suggested to be used as diagnostic and predictive biomarkers of GC, additionally, AADAC may be used as a prognostic marker in these patients for further future confirming studies.

Indexed as

CarcinomaStomach NeoplasmsBiomarkers, TumorCarboxylic Ester HydrolasesCyclin-Dependent Kinase Inhibitor ProteinsDual-Specificity PhosphatasesGene ExpressionHumansNeoplasm GradingAADAC protein, humanBiomarkers, TumorCarboxylic Ester HydrolasesCDKN3 protein, humanCyclin-Dependent Kinase Inhibitor ProteinsDual-Specificity Phosphatases

Identifiers

PMID35446856
PMCPMC9022821
OpenAlexW4224303529

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.