Evidence map›Paper›PMID 35445857›Full record

ArticleApplied microbiology and biotechnology2022

Functional characterization of a novel violacein biosynthesis operon from Janthinobacterium sp. B9-8.

Xian Xu, Xiaoting Chu, Bangmian Du, Chunyan Huang, Chengjia Xie, Zhidong Zhang, Ling Jiang

Abstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Stability of a MutualisticEngineering in life sciences · 2024
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  4. Pigments from pathogenic bacteria: a comprehensive update on recent advances.World journal of microbiology & biotechnology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xian XuSchool of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, 210046, Jiangsu Province, China. xuxian@njnu.edu.cn.ORCID http://orcid.org/0000-0002-4706-6475
Xiaoting ChuState Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, Jiangsu Province, China.
Bangmian DuSchool of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, 210046, Jiangsu Province, China.
Chunyan HuangSchool of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing, 210046, Jiangsu Province, China.
Chengjia XieSchool of Chemical Engineering, Yangzhou Polytechnic Institute, Yangzhou, 225127, Jiangsu Province, China.
Zhidong ZhangInstitute of Microbiology, Xinjiang Academy of Agricultural Sciences, Urumqi, 830091, Xinjiang Uyghur Autonomous Region, People's Republic of China.
Ling JiangCollege of Food Science and Light Industry, Nanjing Tech University, Nanjing, 211816, Jiangsu Province, China.
Nanjing Normal University · CNNanjing Tech University · CNXinjiang Academy of Agricultural Sciences · CNYangzhou Polytechnic Institute · CN

Funding

National Natural Science Foundation of China 21978136National Natural Science Foundation of China 32060004National Natural Science Foundation of China Youth Fund 31922070Natural Science Foundation of Jiangsu Province BK20211268Outstanding Youth Foundation of Jiangsu Province of China BK20180038
6 · The paper itself

Abstract

Violacein is a secondary metabolite mainly produced by Gram-negative bacteria that is formed from tryptophan by five enzymes encoded by a single operon. It is a broad-spectrum antibacterial pigment with various important biological activities such as anti-tumor, antiviral, and antioxidative effects. The newly discovered violacein operon vioABCDE was identified in the genome of the extremophile Janthinobacterium sp. B9-8. The key enzyme-encoding genes were cloned to construct the multigene coexpression plasmids pET-vioAB and pRSF-vioCDE. The violacein biosynthesis pathway was heterologously introduced into engineered Escherichia coli VioABCDE and VioABCDE-SD. The factors affecting violacein production, including temperature, pH, inoculum size, carbon and nitrogen source, precursor, and inducers were investigated. The violacein titer of VioABCDE-SD reached 107 mg/L in a two-stage fermentation process, representing a 454.4% increase over the original strain. The violacein operon from B9-8 provides a new microbial gene source for the analysis of the violacein synthesis mechanism, and the constructed engineering E. coli strains lay a foundation for the efficient and rapid synthesis of other natural products.Key points• The newly discovered violacein operon vioABCDE was identified in the genome of the extremophile Janthinobacterium sp. B9-8.• The violacein synthesis pathway was reconstructed in E. coli using two compatible plasmids.• A two-stage fermentation process was optimized for improved violacein accumulation.

Indexed as

Escherichia coliOxalobacteraceaeIndolesOperonIndolesviolaceinEscherichia coliHigh-throughput sequencingJanthinobacteriumOperonViolacein

Identifiers

PMID35445857
OpenAlexW4224257860

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.