Evidence map›Paper›PMID 35441975›Full record

ArticleIrish journal of medical science2023

Gene expression and transcriptional regulation driven by transcription factors involved in congenital heart defects.

Hira Mubeen, Muhammad Farooq, Asif Ur Rehman, Muhammad Zubair, Asma Haque

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Article in Irish journal of medical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Hira MubeenDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan.
Muhammad FarooqDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan. mfarooq@gcuf.edu.pk.
Asif Ur RehmanPunjab Institute of Cardiology, Lahore, Pakistan.
Muhammad ZubairDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan.
Asma HaqueDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan.
Government College University, Faisalabad · PKPunjab Institute of Cardiology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital heart disease (CHD) is one of the most important birth defects caused by more than one mutated gene. Mutations in the genes could cause different types of congenital heart defects including atrial septal defect (ASD), tetralogy of Fallot (TOF), and ventricular septal defect (VSD).

objectivesCardiac transcription factors are key players for heart development and are actively involved in controlling stress regulation of the heart. Transcription factors are sequence-specific DNA binding proteins that control the process of transcription and work in a synergistic manner. We aim to characterize core cardiac transcription factors including NKX2-5, TBX, SRF, GATA4, and MEF2, which encode homeobox and MADS domain and play a crucial role in heart development.

methodsIn this study, we have explored the important transcription factors involved in cardiac development and genes controlling the expression and regulation process by using the bioinformatics approach.

resultsWe have predicted the orthologs and homologs based on their evolutionary history, conserved protein domains, functional sites, and 3D structures for better understanding and presentation of factors responsible for causing CHD. Results showed the importance of these transcription factors for normal heart functioning and development.

conclusionUnderstanding the molecular pathways and genetic basis of CHD will help to open a new door for the treatment of patients with cardiac defects.

Indexed as

Heart Defects, CongenitalHeart Septal Defects, VentricularGene ExpressionHomeobox Protein Nkx-2.5HumansMutationTranscription FactorsHomeobox Protein Nkx-2.5Transcription FactorsASDGATAMADSMEFNKXSRFTOFVSD

Identifiers

PMID35441975
OpenAlexW4224231110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.