Evidence map›Paper›PMID 35440894›Full record

ArticleProceedings of the ... ICPP Workshops on. International Conference on Parallel Processing Workshops2021

TurboBC: A Memory Efficient and Scalable GPU Based Betweenness Centrality Algorithm in the Language of Linear Algebra.

Oswaldo Artiles, Fahad Saeed

Abstract read
In one paragraph

Article in Proceedings of the ... ICPP Workshops on. International Conference on Parallel Processing Workshops, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Oswaldo ArtilesSchool of Computing and Information Sciences, Florida, International University, Miami, Florida, USA.
Fahad SaeedSchool of Computing and Information Sciences, Florida, International University, Miami, Florida, USA.

Funding

Multimodal Machine-Learning and High Performance Computing Strategies for Big MS Proteomics DataR01GM134384 · NIGMS · FLORIDA INTERNATIONAL UNIVERSITY · PI SAEED, FAHAD · 2020 to 2022
$1.3M
NIGMS NIH HHS R01 GM134384
6 · The paper itself

Abstract

Betweenness centrality (BC) is a shortest path centrality metric used to measure the influence of individual vertices or edges on huge graphs that are used for modeling and analysis of human brain, omics data, or social networks. The application of the BC algorithm to modern graphs must deal with the size of the graphs, as well with highly irregular data-access patterns. These challenges are particularly important when the BC algorithm is implemented on Graphics Processing Units (GPU), due to the limited global memory of these processors, as well as the decrease in performance due to the load unbalance resulting from processing irregular data structures. In this paper, we present the first GPU based linear-algebraic formulation and implementation of BC, called TurboBC, a set of memory efficient BC algorithms that exhibits good performance and high scalability on unweighted, undirected or directed sparse graphs of arbitrary structure. Our experiments demonstrate that our TurboBC algorithms obtain more than 18 GTEPs and an average speedup of 31.9x over the sequential version of the BC algorithm, and are on average 1.7x and 2.2x faster than the state-of-the-art algorithms implemented on the high performance, GPU-based, gunrock, and CPU-based, ligra libraries, respectively. These experiments also show that by minimizing their memory footprint, the TurboBC algorithms are able to compute the BC of relatively big graphs, for which the gunrock algorithms ran out of memory.

Indexed as

centralityCUDAGPUgraph parallel algorithmslinear algebra

Identifiers

PMID35440894
PMCPMC9015014

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.