Evidence map›Paper›PMID 35440550›Full record

ArticleNature communications2022

Low complexity RGG-motif sequence is required for Processing body (P-body) disassembly.

Raju Roy, Gitartha Das, Ishwarya Achappa Kuttanda, Nupur Bhatter, Purusharth I Rajyaguru

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Biomolecular condensates and disease pathogenesis.Science China. Life sciences · 2024
    Review
  7. Article
  8. The FomYjeF Protein Influences the Sporulation and Virulence ofInternational journal of molecular sciences · 2023
    Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Raju RoyDepartment of Biochemistry, Indian Institute of Science, Bangalore, 560012, India.ORCID 0000-0001-9662-3568
Gitartha DasDepartment of Biochemistry, Indian Institute of Science, Bangalore, 560012, India.
Ishwarya Achappa KuttandaDepartment of Biochemistry, Indian Institute of Science, Bangalore, 560012, India.
Nupur BhatterDepartment of Biochemistry, Indian Institute of Science, Bangalore, 560012, India.
Purusharth I RajyaguruDepartment of Biochemistry, Indian Institute of Science, Bangalore, 560012, India. rajyaguru@iisc.ac.in.ORCID 0000-0003-3794-418X
Indian Institute of Science Bangalore · IN

Funding

Wellcome Trust
6 · The paper itself

Abstract

P-bodies are conserved mRNP complexes that are implicated in determining mRNA fate by affecting translation and mRNA decay. In this report, we identify RGG-motif containing translation repressor protein Sbp1 as a disassembly factor of P-bodies since disassembly of P-bodies is defective in Δsbp1. RGG-motif is necessary and sufficient to rescue the PB disassembly defect in Δsbp1. Binding studies using purified proteins revealed that Sbp1 physically interacts with Edc3 and Sbp1-Edc3 interaction competes with Edc3-Edc3 interaction. Purified Edc3 forms assemblies, promoted by the presence of RNA and NADH and the addition of purified Sbp1, but not the RGG-deletion mutant, leads to significantly decreased Edc3 assemblies. We further note that the aggregates of human EWSR1 protein, implicated in neurodegeneration, are more persistent in the absence of Sbp1 and overexpression of EWSR1 in Δsbp1 leads to a growth defect. Taken together, our observations suggest a role of Sbp1 in disassembly, which could apply to disease-relevant heterologous protein-aggregates.

Indexed as

Processing BodiesRNA StabilityHumansRNA, MessengerRNA, Messenger

Identifiers

PMID35440550
PMCPMC9019020
OpenAlexW4224236961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.