Evidence map›Paper›PMID 35440132›Full record

ArticleNature communications2022

Heterogeneity of neuroendocrine transcriptional states in metastatic small cell lung cancers and patient-derived models.

Delphine Lissa, Nobuyuki Takahashi, Parth Desai, Irena Manukyan, Christopher W Schultz, Vinodh Rajapakse, Moises J Velez, Deborah Mulford, Nitin Roper, Samantha Nichols and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 100 citations in OpenAlex.

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  18. The Five-Decade Journey of Small Cell Lung Cancer.Cancer communications (London, England) · 2026
    Review
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  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Delphine Lissa *Laboratory of Human Carcinogenesis, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Nobuyuki Takahashi *Developmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Parth DesaiDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Irena ManukyanLaboratory of Pathology, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.ORCID 0000-0003-2437-0500
Christopher W SchultzDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Vinodh RajapakseDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Moises J VelezDepartment of Pathology, University of Rochester Medical Center, Rochester, NY, 14642, USA.
Deborah MulfordDepartment of Medicine, University of Rochester Medical Center, Rochester, NY, 14642, USA.
Nitin RoperDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Samantha NicholsDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Rasa VilimasDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Linda SciutoDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.
Yuanbin ChenCancer and Hematology Centers of Western Michigan, Grand Rapids, MI, USA.
Udayan GuhaThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.ORCID 0000-0003-1087-9218
Arun RajanThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA.ORCID 0000-0003-2776-3385
Devon AtkinsonCenter for Advanced Preclinical Research, Leidos Biomedical Research, Inc, Frederick National Laboratory for Cancer Research, Frederick, MD, 21702, USA.ORCID 0000-0002-6675-1531
Rajaa El MeskiniCenter for Advanced Preclinical Research, Leidos Biomedical Research, Inc, Frederick National Laboratory for Cancer Research, Frederick, MD, 21702, USA.ORCID 0000-0003-3238-7038
Zoe Weaver OhlerCenter for Advanced Preclinical Research, Leidos Biomedical Research, Inc, Frederick National Laboratory for Cancer Research, Frederick, MD, 21702, USA.ORCID 0000-0002-6287-2504
Anish ThomasDevelopmental Therapeutics Branch, Center for Cancer Research, NCI, Bethesda, MD, 20892, USA. anish.thomas@nih.gov.ORCID 0000-0003-3293-3115
Center for Cancer Research · USLeidos (United States) · USUniversity of Rochester Medical Center · USHematology Oncology Consultants · USNational Center for Global Health and Medicine · JP

Funding

Exploiting DNA Replicative Stress for Novel Small Cell Lung Cancer TherapiesZIABC011793 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI THOMAS, ANISH · 2018 to 2025
$16.4M
Epigenetic and immunologic aspects of neuroendocrine cancersZIABC011989 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ROPER, NITIN · 2020 to 2025
$5.8M
Anti-PD-L1-TGFb antibody (M7824) in advanced Non-Small Cell Lung CancerZIABC011905 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RAJAN, ARUN · 2019 to 2025
$817k
Intramural NIH HHS ZIA BC011793
6 · The paper itself

Abstract

Molecular subtypes of small cell lung cancer (SCLC) defined by the expression of key transcription regulators have recently been proposed in cell lines and limited number of primary tumors. The clinical and biological implications of neuroendocrine (NE) subtypes in metastatic SCLC, and the extent to which they vary within and between patient tumors and in patient-derived models is not known. We integrate histology, transcriptome, exome, and treatment outcomes of SCLC from a range of metastatic sites, revealing complex intra- and intertumoral heterogeneity of NE differentiation. Transcriptomic analysis confirms previously described subtypes based on ASCL1, NEUROD1, POU2F3, YAP1, and ATOH1 expression, and reveal a clinical subtype with hybrid NE and non-NE phenotypes, marked by chemotherapy-resistance and exceedingly poor outcomes. NE tumors are more likely to have RB1, NOTCH, and chromatin modifier gene mutations, upregulation of DNA damage response genes, and are more likely to respond to replication stress targeted therapies. In contrast, patients preferentially benefited from immunotherapy if their tumors were non-NE. Transcriptional phenotypes strongly skew towards the NE state in patient-derived model systems, an observation that was confirmed in paired patient-matched tumors and xenografts. We provide a framework that unifies transcriptomic and genomic dimensions of metastatic SCLC. The marked differences in transcriptional diversity between patient tumors and model systems are likely to have implications in development of novel therapeutic agents.

Indexed as

Lung NeoplasmsNeuroendocrine TumorsSmall Cell Lung CarcinomaGene Expression Regulation, NeoplasticHumansTranscription FactorsTranscription Factors

Identifiers

PMID35440132
PMCPMC9018864
OpenAlexW4224231118

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.