Evidence map›Paper›PMID 35439320›Full record

ArticleMolecular cancer therapeutics2022

TOP1-DNA Trapping by Exatecan and Combination Therapy with ATR Inhibitor.

Ukhyun Jo, Yasuhisa Murai, Keli K Agama, Yilun Sun, Liton Kumar Saha, Xi Yang, Yasuhiro Arakawa, Sophia Gayle, Kelli Jones, Vishwas Paralkar and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Ukhyun JoDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0002-2826-1355
Yasuhisa MuraiDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0002-3305-1248
Keli K AgamaDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0002-0505-8645
Yilun SunDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0002-6249-2704
Liton Kumar SahaDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0003-3391-280X
Xi YangDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0003-0689-1417
Yasuhiro ArakawaDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0001-5281-6798
Sophia GayleCybrexa Therapeutics, New Haven, Connecticut.ORCID 0000-0003-3644-0756
Kelli JonesCybrexa Therapeutics, New Haven, Connecticut.ORCID 0000-0002-9282-1249
Vishwas ParalkarCybrexa Therapeutics, New Haven, Connecticut.ORCID 0000-0003-2852-6533
Ranjini K SundaramDepartment of Therapeutic Radiology, Yale School of Medicine, New Haven, Connecticut.ORCID 0000-0002-5725-0284
Jinny Van DoornDepartment of Therapeutic Radiology, Yale School of Medicine, New Haven, Connecticut.ORCID 0000-0003-1300-7132
Juan C VasquezDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut.ORCID 0000-0002-9031-7639
Ranjit S BindraDepartment of Therapeutic Radiology, Yale School of Medicine, New Haven, Connecticut.ORCID 0000-0002-3255-0467
Woo Suk ChoiLaboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, Maryland.ORCID 0000-0002-2651-5833
Yves PommierDevelopmental Therapeutics Branch and Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.ORCID 0000-0002-3108-0758
National Cancer Institute · USYale University · USMelinta Therapeutics (United States) · USHirosaki University · JPNational Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
DNA Topoisomerases as Target of Action of Anticancer DrugsZIABC006161 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 2009 to 2025
$16.8M
YALE CANCER CENTER CALABRESI IMMUNO-ONCOLOGY TRAINING PROGRAMK12CA215110 · NCI · YALE UNIVERSITY · PI Harriet M. Kluger · 2018 to 2026
$6.1M
Targeting the DNA damage response with PARP and ATR inhibition to potentiate cytotoxicity and improve efficacy of immune checkpoint blockade in IDH mutant gliomasK08CA258796 · NCI · YALE UNIVERSITY · PI VASQUEZ, JUAN C · 2021 to 2025
$1.2M
Intramural NIH HHS Z99 CA999999NCATS NIH HHS UL1 TR001863NCI NIH HHS K08 CA258796NCI NIH HHS K12 CA215110
6 · The paper itself

Abstract

Exatecan and deruxtecan are antineoplastic camptothecin derivatives in development as tumor-targeted-delivery warheads in various formulations including peptides, liposomes, polyethylene glycol nanoparticles, and antibody-drug conjugates. Here, we report the molecular pharmacology of exatecan compared with the clinically approved topoisomerase I (TOP1) inhibitors and preclinical models for validating biomarkers and the combination of exatecan with ataxia telangiectasia and Rad3-related kinase (ATR) inhibitors. Modeling exatecan binding at the interface of a TOP1 cleavage complex suggests two novel molecular interactions with the flanking DNA base and the TOP1 residue N352, in addition to the three known interactions of camptothecins with the TOP1 residues R364, D533, and N722. Accordingly, exatecan showed much stronger TOP1 trapping, higher DNA damage, and apoptotic cell death than the classical TOP1 inhibitors used clinically. We demonstrate the value of SLFN11 expression and homologous recombination (HR) deficiency (HRD) as predictive biomarkers of response to exatecan. We also show that exatecan kills cancer cells synergistically with the clinical ATR inhibitor ceralasertib (AZD6738). To establish the translational potential of this combination, we tested CBX-12, a clinically developed pH-sensitive peptide-exatecan conjugate that selectively targets cancer cells and is currently in clinical trials. The combination of CBX-12 with ceralasertib significantly suppressed tumor growth in mouse xenografts. Collectively, our results demonstrate the potency of exatecan as a TOP1 inhibitor and its clinical potential in combination with ATR inhibitors, using SLFN11 and HRD as predictive biomarkers.

Indexed as

DNA Topoisomerases, Type INeoplasmsTopoisomerase I InhibitorsAnimalsAtaxia Telangiectasia Mutated ProteinsCamptothecinDNAHumansMiceNuclear ProteinsProtein Kinase InhibitorsAtaxia Telangiectasia Mutated ProteinsATR protein, humanCamptothecinDNADNA Topoisomerases, Type IexatecanNuclear ProteinsProtein Kinase InhibitorsSLFN11 protein, humanTOP1 protein, humanTopoisomerase I Inhibitors

Identifiers

PMID35439320
PMCPMC9256811
OpenAlexW4224247117

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.