Evidence map›Paper›PMID 35438764›Full record

ArticleNucleic acids research2022

The TH1 cell lineage-determining transcription factor T-bet suppresses TH2 gene expression by redistributing GATA3 away from TH2 genes.

Arnulf Hertweck, Maria Vila de Mucha, Paul R Barber, Robert Dagil, Hayley Porter, Andres Ramos, Graham M Lord, Richard G Jenner

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 41 citations in OpenAlex.

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  12. Immune pathway through endometriosis to ovarian cancer.World journal of clinical oncology · 2024
    Review
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  14. Review
  15. Advanced biomedical research · 2024
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  16. Early immune response toFrontiers in cellular and infection microbiology · 2024
    Article
  17. Genome-Wide Association Analysis of Heat Tolerance in FInternational journal of molecular sciences · 2023
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Arnulf HertweckUCL Cancer Institute and Cancer Research UK UCL Centre, University College London (UCL), London, WC1E 6BT, UK.ORCID 0000-0002-8609-8146
Maria Vila de MuchaUCL Cancer Institute and Cancer Research UK UCL Centre, University College London (UCL), London, WC1E 6BT, UK.
Paul R BarberUCL Cancer Institute and Cancer Research UK UCL Centre, University College London (UCL), London, WC1E 6BT, UK.ORCID 0000-0002-8595-1141
Robert DagilResearch Department of Structural and Molecular Biology, University College London, Darwin Building, Gower Street, London, WC1E 6XA, UK.ORCID 0000-0002-5594-0716
Hayley PorterUCL Cancer Institute and Cancer Research UK UCL Centre, University College London (UCL), London, WC1E 6BT, UK.
Andres RamosResearch Department of Structural and Molecular Biology, University College London, Darwin Building, Gower Street, London, WC1E 6XA, UK.ORCID 0000-0002-9295-8042
Graham M LordFaculty of Biology, Medicine and Health, University of Manchester, Manchester, M13 9NT, UK.
Richard G JennerUCL Cancer Institute and Cancer Research UK UCL Centre, University College London (UCL), London, WC1E 6BT, UK.ORCID 0000-0002-2946-6811
Cancer Research UK · GBInstitute of Structural and Molecular Biology · GBKing's College London · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L009277/1Cancer Research UK C1519/A10331Cancer Research UK C1519/A16463Cancer Research UK C416/A25145Cancer Research UK C7675/A29313Medical Research Council MC_PC_13051Medical Research Council MR/R001413/1Medical Research Council MR/S000305/1Medical Research Council MR/W002337/1
6 · The paper itself

Abstract

Lineage-determining transcription factors (LD-TFs) drive the differentiation of progenitor cells into a specific lineage. In CD4+ T cells, T-bet dictates differentiation of the TH1 lineage, whereas GATA3 drives differentiation of the alternative TH2 lineage. However, LD-TFs, including T-bet and GATA3, are frequently co-expressed but how this affects LD-TF function is not known. By expressing T-bet and GATA3 separately or together in mouse T cells, we show that T-bet sequesters GATA3 at its target sites, thereby removing GATA3 from TH2 genes. This redistribution of GATA3 is independent of GATA3 DNA binding activity and is instead mediated by the T-bet DNA binding domain, which interacts with the GATA3 DNA binding domain and changes GATA3's sequence binding preference. This mechanism allows T-bet to drive the TH1 gene expression program in the presence of GATA3. We propose that redistribution of one LD-TF by another may be a common mechanism that could explain how specific cell fate choices can be made even in the presence of other transcription factors driving alternative differentiation pathways.

Indexed as

GATA3 Transcription FactorTh2 CellsAnimalsCell LineageDNAGene ExpressionMiceT-bet Transcription FactorT-Box Domain ProteinsDNAGata3 protein, mouseGATA3 Transcription FactorT-bet Transcription FactorT-Box Domain Proteins

Identifiers

PMID35438764
PMCPMC9071441
OpenAlexW4224238748

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.