Evidence map›Paper›PMID 35435726›Full record

ArticleInfection and immunity2022

Functional Characterization of Non-Ankyrin Repeat Domains of Orientia tsutsugamushi Ank Effectors Reveals Their Importance for Molecular Pathogenesis.

Sarika Gupta, Jason R Hunt, Haley E Adcox, Shelby E Andersen, Jacob J Gumpf, Ryan S Green, Andrea R Beyer, Sean M Evans, Lauren VieBrock, Curtis B Read and 2 more

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Transformation and allelic exchange inbioRxiv : the preprint server for biology · 2026
    Article
  3. mBio · 2026
    Article
  4. Article
  5. Pathogens (Basel, Switzerland) · 2025
    Article
  6. Infection and immunity · 2025
    Article
  7. Infection and immunity · 2024
    Article
  8. crANKing up the infection: ankyrin domains inInfection and immunity · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Sarika GuptaDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Jason R HuntDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Haley E AdcoxDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Shelby E AndersenDepartment of Microbiology and Immunology, University of Iowagrid.214572.7 Health Care, Carver College of Medicine, Iowa City, Iowa, USA.
Jacob J GumpfDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Ryan S GreenDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Andrea R BeyerDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Sean M EvansDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Lauren VieBrockDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Curtis B ReadDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.
Mary M WeberDepartment of Microbiology and Immunology, University of Iowagrid.214572.7 Health Care, Carver College of Medicine, Iowa City, Iowa, USA.ORCID 0000-0001-5126-2164
Jason A CarlyonDepartment of Microbiology and Immunology, Virginia Commonwealth University Medical Center, School of Medicine, Richmond, Virginia, USA.ORCID 0000-0003-2778-5066
Virginia Commonwealth University Medical Center · USUniversity of Iowa Health Care · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Keri R Maher · 1985 to 2026
$51.0M
Functional characterization of Chlamydia trachomatis inclusion membrane proteins and their role in subversion of the host vesicular traffickingR01AI150812 · NIAID · UNIVERSITY OF IOWA · PI Mary Weber · 2020 to 2026
$3.5M
Orientia tsutsugamushi Ank-host interactions in scrub typhus pathogenesisR01AI167857 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI Jason A Carlyon · 2022 to 2026
$2.9M
The role of secreted effector proteins in Chlamydia trachomatis invasionR01AI155434 · NIAID · UNIVERSITY OF IOWA · PI WEBER, MARY · 2020 to 2024
$2.5M
Defining the pathobiological roles of Orientia tsutsugamushi Ank proteinsR01AI123346 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CARLYON, JASON A · 2017 to 2020
$1.5M
Defining the pathobiological roles of Orientia tsutsugamushi Ank proteinsR56AI123346 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CARLYON, JASON A · 2016 to 2021
$833k
NCI NIH HHS P30 CA016059NIAID NIH HHS R01 AI123346NIAID NIH HHS R01 AI150812NIAID NIH HHS R01 AI155434NIAID NIH HHS R01 AI167857NIAID NIH HHS R56 AI123346
6 · The paper itself

Abstract

Orientia tsutsugamushi is a genetically intractable obligate intracellular bacterium, causes scrub typhus, and has one of the largest known armamentariums of ankyrin repeat-containing effectors (Anks). Most have a C-terminal F-box presumed to interact with the SCF ubiquitin ligase complex primarily based on their ability to bind overexpressed Skp1. Whether all F-box-containing Anks bind endogenous SCF components and the F-box residues essential for such interactions has gone unexplored. Many O. tsutsugamushi Ank F-boxes occur as part of a PRANC (pox protein repeats of ankyrin-C-terminal) domain. Roles of the non-F-box portion of the PRANC and intervening sequence region (ISR) that links the ankyrin repeat and F-box/PRANC domains are unknown. The functional relevance of these effectors' non-ankyrin repeat domains was investigated. The F-box was necessary for Flag-tagged versions of most F-box-containing Anks to precipitate endogenous Skp1, Cul1, and/or Rbx1, while the ISR and PRANC were dispensable. Ank toxicity in yeast was predominantly F-box dependent. Interrogations of Ank1, Ank5, and Ank6 established that L1, P2, E4, I9, and D17 of the F-box consensus are key for binding native SCF components and for Ank1 and Ank6 to inhibit NF-κB. The ISR is also essential for Ank1 and Ank6 to impair NF-κB. Ectopically expressed Ank1 and Ank6 lacking the ISR or having a mutagenized F-box incapable of binding SCF components performed as dominant-negative inhibitors to block O. tsutsugamushi NF-κB modulation. This study advances knowledge of O. tsutsugamushi Ank functional domains and offers an approach for validating their roles in infection.

Indexed as

Orientia tsutsugamushiScrub TyphusAnkyrin RepeatBacterial ProteinsHumansNF-kappa BBacterial ProteinsNF-kappa Bankyrinbacterial effectorF-boxintracellular bacteriaNF-κBOrientiaPRANCRickettsiascrub typhusyeast toxicity

Identifiers

PMID35435726
PMCPMC9119115
OpenAlexW4223923707

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.