Evidence map›Paper›PMID 35435718›Full record

ArticleApplied and environmental microbiology2022

Comparative Genomic Analysis of Salmonella enterica Serovar Typhimurium Isolates from Passerines Reveals Two Lineages Circulating in Europe, New Zealand, and the United States.

Yezhi Fu, Nkuchia M M'ikanatha, Edward G Dudley

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Host adaptation inApplied and environmental microbiology · 2026
    Review
  3. Animals : an open access journal from MDPI · 2024
    Review
  4. Article
  5. Methods for Genomic Epidemiology of Bacterial Pathogens: Example Salmonella.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yezhi FuDepartment of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0002-0510-9190
Nkuchia M M'ikanathaPennsylvania Department of Healthgrid.280365.a, Harrisburg, Pennsylvania, USA.
Edward G DudleyDepartment of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0003-1298-1603
Pennsylvania State University · USPennsylvania Department of Health · US

Funding

Genome Sequencing of Foodborne Pathogens by the Pennsylvania GenomeTrakr GroupU19FD007114 · FDA · PENNSYLVANIA STATE UNIVERSITY, THE · PI DUDLEY, EDWARD G. · 2020 to 2024
$1.1M
Pennsylvania Retail Meat Program - Collaboration with FDA National Antimicrobial Resistance Monitoring Systems (NARMS)U01FD006253 · FDA · PENNSYLVANIA STATE DEPT OF HEALTH · PI M'IKANATHA, NKUCHIA MUGAMBI · 2017 to 2019
$389k
FDA HHS U01 FD006253FDA HHS U19 FD007114
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium strains from passerines have caused wild bird deaths and human salmonellosis outbreaks in Europe, Oceania, and North America. Here, we performed comparative genomic analysis to explore the emergence, genetic relationship, and evolution of geographically dispersed passerine isolates. We found that passerine isolates from Europe and the United States clustered to form two lineages (EU and US passerine lineages), which were distinct from major

Indexed as

PasseriformesSalmonella entericaSalmonella Infections, AnimalAnimalsCattleChickensEuropeGenomicsNew ZealandPhylogenySalmonella typhimuriumSerogroupSwineUnited Statescomparative genomic analysishost adaptationoutbreakpasserineSalmonella enterica serovar Typhimurium

Identifiers

PMID35435718
PMCPMC9088394
OpenAlexW4224123450

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.