Evidence map›Paper›PMID 35435701›Full record

ArticlemBio2022

Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers.

Justin C Podowski, Sara F Paver, Ryan J Newton, Maureen L Coleman

Abstract read
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Justin C PodowskiDepartment of the Geophysical Sciences, University of Chicagogrid.170205.1, Chicago, Illinois, USA.
Sara F PaverDepartment of the Geophysical Sciences, University of Chicagogrid.170205.1, Chicago, Illinois, USA.
Ryan J NewtonSchool of Freshwater Sciences, University of Wisconsin Milwaukee, Milwaukee, Wisconsin, USA.
Maureen L ColemanDepartment of the Geophysical Sciences, University of Chicagogrid.170205.1, Chicago, Illinois, USA.ORCID 0000-0001-5065-0106

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial nitrification is a critical process governing nitrogen availability in aquatic systems. Freshwater nitrifiers have received little attention, leaving many unanswered questions about their taxonomic distribution, functional potential, and ecological interactions. Here, we reconstructed genomes to infer the metabolism and ecology of free-living picoplanktonic nitrifiers across the Laurentian Great Lakes, a connected series of five of Earth's largest lakes. Surprisingly, ammonia-oxidizing bacteria (AOB) related to

Indexed as

AmmoniaEcosystemArchaeaBacteriaGenomeLakesNitrificationNitrogenOxidation-ReductionPhylogenyRhodopsins, MicrobialAmmoniaNitrogenproteorhodopsinRhodopsins, Microbialbiogeochemistryecological genomicsfreshwatermetagenomicsnitrification

Identifiers

PMID35435701
PMCPMC9239080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.