Evidence map›Paper›PMID 35434174›Full record

ArticleOpen forum infectious diseases2022

Pretreatment Human Immunodeficiency Virus (HIV) Drug Resistance Among Treatment-Naive Infants Newly Diagnosed With HIV in 2016 in Namibia: Results of a Nationally Representative Study.

Michael R Jordan, Leonard Bikinesi, Laimi Ashipala, Nicholus Mutenda, Mary Brantuo, Gillian Hunt, Andreas Shiningavamwe, Gram Mutandi, Anita Beukes, Suzanne Beard and 7 more

Open access · goldAbstract read
In one paragraph

Article in Open forum infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 4 countries.

Michael R JordanDivision of Geographic Medicine and Infectious Diseases, Tufts Medical Center, Boston, Massachusetts, USA.
Leonard BikinesiDirectorate of Special Programmes, Republic of Namibia Ministry of Health and Social Services, Windhoek, Namibia.
Laimi AshipalaDirectorate of Special Programmes, Republic of Namibia Ministry of Health and Social Services, Windhoek, Namibia.
Nicholus MutendaDirectorate of Special Programmes, Republic of Namibia Ministry of Health and Social Services, Windhoek, Namibia.
Mary BrantuoWorld Health Organization, Windhoek, Namibia.
Gillian HuntCentre for HIV and STIs, National Institute for Communicable Diseases, National Health Laboratory Services, Johannesburg, South Africa.
Andreas ShiningavamweNamibia Institute of Pathology, Windhoek, Namibia.
Gram MutandiDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Anita BeukesDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Suzanne BeardDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Katherine BatteyDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Eric J DziubanDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Elliot RaizesDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0001-5121-877X
Paul AdjeiDivision of Geographic Medicine and Infectious Diseases, Tufts Medical Center, Boston, Massachusetts, USA.
Alice TangDepartment of Public Health and Community Medicine, Tufts University School of Medicine, Boston, Massachusetts, USA.
Amalia GironDepartment of Global HIV, Hepatitis and STI Programmes, World Health Organization, Geneva, Switzerland.
Steven Y HongDivision of Global HIV and TB, Center for Global Health, Centers for Disease Control and Prevention, Windhoek, Namibia.
Centers for Disease Control and Prevention · USMinistry of Health and Social Services · NATufts University · USNamibia Institute of Pathology · NANational Health Laboratory Service · ZATufts Medical Center · USWorld Health Organization · CH

Funding

World Health Organization 001
6 · The paper itself

Abstract

Background: The World Health Organization (WHO) recommends routine surveillance of pretreatment human immunodeficiency virus (HIV) drug resistance (HIVDR) in children <18 months of age diagnosed with HIV through early infant diagnosis (EID). In 2016, 262 children <18 months of age were diagnosed with HIV in Namibia through EID. Levels of HIVDR in this population are unknown. Methods: In 2016, Namibia surveyed pretreatment HIVDR among children aged <18 months following WHO guidance. Reverse transcriptase, protease, and integrase regions of HIV-1 were genotyped from remnant dried blood spot specimens from all infants diagnosed with HIV in Namibia in 2016. HIVDR was predicted using the Stanford HIVdb algorithm. Results: Of 262 specimens genotyped, 198 HIV-1 protease and reverse transcriptase sequences and 118 HIV-1 integrase sequences were successfully amplified and analyzed. The prevalence of efavirenz/nevirapine (EFV/NVP), abacavir (ABC), zidovudine, lamivudine/emtricitabine (3TC/FTC), and tenofovir (TDF) resistance was 62.6%, 17.7%, 5.6%, 15.7%, and 10.1%, respectively. No integrase inhibitor resistance was detected. Conclusions: The high level of EFV/NVP resistance is unsurprising; however, levels of ABC and TDF resistance are among the highest observed to date in infants in sub-Saharan Africa. The absence of resistance to dolutegravir (DTG) is reassuring but underscores the need to further study the impact of ABC and 3TC/FTC resistance on pediatric protease inhibitor- and DTG-based regimens and accelerate access to other antiretroviral drugs. Results underscore the need for antiretroviral therapy optimization and prompt management of high viral loads in infants and pregnant and breastfeeding women.

Indexed as

drug resistanceHIVinfantsNamibia

Identifiers

PMID35434174
PMCPMC9007920
OpenAlexW4220673468

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.