Evidence map›Paper›PMID 35433514›Full record

ArticleFrontiers in cellular and infection microbiology2022

Oral and Stool Microbiome Coalescence and Its Association With Antibiotic Exposure in Acute Leukemia Patients.

Samantha Franklin, Samuel L Aitken, Yushi Shi, Pranoti V Sahasrabhojane, Sarah Robinson, Christine B Peterson, Naval Daver, Nadim A Ajami, Dimitrios P Kontoyiannis, Samuel A Shelburne and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. The fungal pathogenISME communications · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Pathogens (Basel, Switzerland) · 2025
    Article
  7. Article
  8. Observational
  9. Article
  10. Oral and Gut Microbiome Alterations in Oral Chronic GVHD Disease: Results from Close Assessment and Testing for Chronic GVHD (CATCH Study).Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  11. Low utilization of vancomycin in febrile neutropenia: real-world evidence from 4 Brazilian centers.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2023
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Samantha FranklinDepartment of Veterinary Pathobiology, Texas A&M University, College Station, TX, United States.
Samuel L AitkenDepartment of Pharmacy, Michigan Medicine, Ann Arbor, MI, United States.
Yushi ShiDepartment of Statistics and Center for Biomedical Informatics, University of Missouri, Columbia, MO, United States.
Pranoti V SahasrabhojaneDepartment of Infectious Disease, Infection Control and Employee Health, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Sarah RobinsonDepartment of Statistics, Rice University, Houston, TX, United States.
Christine B PetersonDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Naval DaverDepartment of Leukemia, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Nadim A AjamiDepartment of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Dimitrios P KontoyiannisDepartment of Infectious Disease, Infection Control and Employee Health, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Samuel A ShelburneDepartment of Infectious Disease, Infection Control and Employee Health, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.
Jessica Galloway-PeñaDepartment of Veterinary Pathobiology, Texas A&M University, College Station, TX, United States.
The University of Texas MD Anderson Cancer Center · USMichigan Medicine · USRice University · USTexas A&M University · USUniversity of Missouri · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Training Program in Biostatistics for Cancer ResearchT32CA096520 · NCI · RICE UNIVERSITY · PI KIMMEL, MAREK, YUAN, YING · 2003 to 2023
$4.5M
Identifying Risk Factors for Antibiotic Resistance via Integration of Epidemiology and MetagenomicsK01AI143881 · NIAID · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI GALLOWAY-PENA, JESSICA RHEA · 2019 to 2023
$545k
NCI NIH HHS P30 CA016672NCI NIH HHS T32 CA096520NIAID NIH HHS K01 AI143881
6 · The paper itself

Abstract

Failure to maintain segregation of oral and gut microbial communities has been linked to several diseases. We sought to characterize oral-fecal microbiome community coalescence, ectopic extension of oral bacteria, clinical variables contributing to this phenomenon, and associated infectious consequences by analyzing the 16S rRNA V4 sequences of longitudinal fecal (n=551) and oral (n=737) samples from 97 patients with acute myeloid leukemia (AML) receiving induction chemotherapy (IC). Clustering observed in permutation based multivariate analysis of variance (PERMANOVA) of Bray-Curtis dissimilarity and PCoA plot of UniFrac distances between intra-patient longitudinal oral-stool sample pairs suggested potential oral-stool microbial community coalescence. Bray-Curtis dissimilarities and UniFrac distances were used to create an objective definition of microbial community coalescence. We determined that only 23 of the 92 patients exhibited oral-stool community coalescence. This was validated through a linear mixed model which determined that patients who experienced coalescence had an increased proportion of shared to unique OTUs between their oral-stool sample pairs over time compared to non-coalesced patients. Evaluation of longitudinal microbial characteristics revealed that patients who experienced coalescence had increased stool abundance of

Indexed as

Gastrointestinal MicrobiomeLeukemia, Myeloid, AcuteMicrobiotaAnti-Bacterial AgentsFecesHumansRNA, Ribosomal, 16SAnti-Bacterial AgentsRNA, Ribosomal, 16Santimicrobialscoalescenceleukemiamicrobiomeoralization

Identifiers

PMID35433514
PMCPMC9010033
OpenAlexW4220891946

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.