Evidence map›Paper›PMID 35432262›Full record

ArticleFrontiers in microbiology2022

Metagenomic Insights Into the Changes of Antibiotic Resistance and Pathogenicity Factor Pools Upon Thermophilic Composting of Human Excreta.

Katharina A Werner, Dominik Schneider, Anja Poehlein, Nina Diederich, Lara Feyen, Katharina Axtmann, Tobias Hübner, Nicolas Brüggemann, Katharina Prost, Rolf Daniel and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Katharina A WernerDepartment of Microbiology, Faculty of Life Sciences and Technology, Berliner Hochschule für Technik, Berlin, Germany.
Dominik SchneiderDepartment of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University Göttingen, Göttingen, Germany.
Anja PoehleinDepartment of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University Göttingen, Göttingen, Germany.
Nina DiederichDepartment of Microbiology, Faculty of Life Sciences and Technology, Berliner Hochschule für Technik, Berlin, Germany.
Lara FeyenDepartment of Microbiology, Faculty of Life Sciences and Technology, Berliner Hochschule für Technik, Berlin, Germany.
Katharina AxtmannInstitute for Medical Microbiology, Immunology and Parasitology, University Hospital Bonn, Bonn, Germany.
Tobias HübnerDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research GmbH-Umweltforschungszentrum Leipzig (UFZ), Leipzig, Germany.
Nicolas BrüggemannInstitute of Bio- and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich, Jülich, Germany.
Katharina ProstInstitute of Bio- and Geosciences-Agrosphere (IBG-3), Forschungszentrum Jülich, Jülich, Germany.
Rolf DanielDepartment of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University Göttingen, Göttingen, Germany.
Elisabeth GrohmannDepartment of Microbiology, Faculty of Life Sciences and Technology, Berliner Hochschule für Technik, Berlin, Germany.
Berliner Hochschule für Technik · DEUniversity of Göttingen · DEForschungszentrum Jülich · DEHelmholtz Centre for Environmental Research · DEUniversity Hospital Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In times of climate change, practicing a form of sustainable, climate-resilient and productive agriculture is of primordial importance. Compost could be one form of sustainable fertilizer, which is increasing humus, water holding capacity, and nutrient contents of soils. It could thereby strengthen agriculture toward the adverse effects of climate change, especially when additionally combined with biochar. To get access to sufficient amounts of suitable materials for composting, resources, which are currently treated as waste, such as human excreta, could be a promising option. However, the safety of the produced compost regarding human pathogens, pharmaceuticals (like antibiotics) and related resistance genes must be considered. In this context, we have investigated the effect of 140- and 154-days of thermophilic composting on the hygienization of human excreta and saw dust from dry toilets together with straw and green cuttings with and without addition of biochar. Compost samples were taken at the beginning and end of the composting process and metagenomic analysis was conducted to assess the fate of antibiotic resistance genes (ARGs) and pathogenicity factors of the microbial community over composting. Potential ARGs conferring resistance to major classes of antibiotics, such as beta-lactam antibiotics, vancomycin, the MLS

Indexed as

antibiotic resistancebacterial communitycompostecological sanitationhuman excretametagenomicspathogenicityqPCR (quantitative PCR)

Identifiers

PMID35432262
PMCPMC9009411
OpenAlexW4220749984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.