Evidence map›Paper›PMID 35430892›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2022

How HLA diversity is apportioned: influence of selection and relevance to transplantation.

André Silva Maróstica, Kelly Nunes, Erick C Castelli, Nayane S B Silva, Bruce S Weir, Jérôme Goudet, Diogo Meyer

Abstract readCase Reports
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Anti-HLA antibodies in lung transplantation: diagnostic pitfalls and future directions.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Inferring Balancing Selection From Genome-Scale Data.Genome biology and evolution · 2023
    Review
  10. [Molecular biology in a blood bank].Revista medica del Instituto Mexicano del Seguro Social · 2023
    Review
  11. Review
  12. The background and legacy of Lewontin's apportionment of human genetic diversity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  13. Celebrating 50 years since Lewontin's apportionment of human diversity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  14. Mathematical constraints onPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

André Silva MarósticaDepartamento de Genética e Biologia Evolutiva, Universidade de São Paulo, São Paulo, SP, Brazil.
Kelly NunesDepartamento de Genética e Biologia Evolutiva, Universidade de São Paulo, São Paulo, SP, Brazil.
Erick C CastelliDepartamento de Patologia, Universidade Estadual Paulista - Unesp, Faculdade de Medicina de Botucatu, Botucatu, SP, Brazil.
Nayane S B SilvaMolecular Genetics and Bioinformatics Laboratory, Experimental Research Unit, School of Medicine, São Paulo State University - Unesp, Botucatu, SP, Brazil.
Bruce S WeirDepartment of Biostatistics, University of Washington, Seattle, WA 98195, USA.
Jérôme GoudetDepartment of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0002-5318-7601
Diogo MeyerDepartamento de Genética e Biologia Evolutiva, Universidade de São Paulo, São Paulo, SP, Brazil.ORCID 0000-0002-7155-5674

Funding

Theoretical Population Genetics SupplementR01GM075091 · NIGMS · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2006 to 2020
$4.7M
NIGMS NIH HHS R01 GM075091
6 · The paper itself

Abstract

In his 1972 paper 'The apportionment of human diversity', Lewontin showed that, when averaged over loci, genetic diversity is predominantly attributable to differences among individuals within populations. However, selection can alter the apportionment of diversity of specific genes or genomic regions. We examine genetic diversity at the human leucocyte antigen (HLA) loci, located within the major histocompatibility complex (MHC) region. HLA genes code for proteins that are critical to adaptive immunity and are well-documented targets of balancing selection. The single-nucleotide polymorphisms (SNPs) within HLA genes show strong signatures of balancing selection on large timescales and are broadly shared among populations, displaying low

Indexed as

Major Histocompatibility ComplexPolymorphism, Single NucleotideAllelesGene FrequencyHaplotypesHumansHLA genesMHCpopulation-specific FSTpopulation structuretransplantation

Identifiers

PMID35430892
PMCPMC9014195

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.