Evidence map›Paper›PMID 35430776›Full record

ArticleGenes to cells : devoted to molecular & cellular mechanisms2022

The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans.

Yukihiro Kubota, Natsumi Ota, Hisashi Takatsuka, Takuma Unno, Shuichi Onami, Asako Sugimoto, Masahiro Ito

Open access · hybridAbstract read
In one paragraph

Article in Genes to cells : devoted to molecular & cellular mechanisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Temporal Analysis of Embryonic Epidermal Morphogenesis inInternational journal of molecular sciences · 2025
    Article
  2. Rtf1 Transcriptionally Regulates Neonatal and Adult Cardiomyocyte Biology.Journal of cardiovascular development and disease · 2023
    Article
  3. Article
  4. The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans.Genes to cells : devoted to molecular & cellular mechanisms · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yukihiro KubotaDepartment of Bioinformatics, College of Life Sciences, Ritsumeikan University, Kusatsu, Japan.ORCID https://orcid.org/0000-0002-8151-9888
Natsumi OtaAdvanced Life Sciences Program, Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.
Hisashi TakatsukaAdvanced Life Sciences Program, Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.
Takuma UnnoAdvanced Life Sciences Program, Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.
Shuichi OnamiAdvanced Life Sciences Program, Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.ORCID https://orcid.org/0000-0002-8255-1724
Asako SugimotoLaboratory of Developmental Dinamics, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.ORCID https://orcid.org/0000-0001-6001-4293
Masahiro ItoDepartment of Bioinformatics, College of Life Sciences, Ritsumeikan University, Kusatsu, Japan.ORCID https://orcid.org/0000-0001-8364-8440
Ritsumeikan University · JPTohoku University · JP

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440Takeda Science Foundation
6 · The paper itself

Abstract

The RNA polymerase II-associated factor 1 complex (PAF1C) is a protein complex that consists of LEO1, RTF1, PAF1, CDC73, and CTR9, and has been shown to be involved in RNA polymerase II-mediated transcriptional and chromatin regulation. Although it has been shown to regulate a variety of biological processes, the precise role of the PAF1C during germ line development has not been clarified. In this study, we found that reduction in the function of the PAF1C components, LEO-1, RTFO-1, PAFO-1, CDC-73, and CTR-9, in Caenorhabditis elegans affects oogenesis. Defects in oogenesis were also confirmed using an oocyte maturation marker, OMA-1::GFP. While four to five OMA-1::GFP-positive oocytes were observed in wild-type animals, their numbers were significantly decreased in pafo-1 mutant and leo-1(RNAi), pafo-1(RNAi), and cdc-73(RNAi) animals. Expression of a functional PAFO-1::mCherry transgene in the germline significantly rescued the oogenesis-defective phenotype of the pafo-1 mutants, suggesting that expression of the PAF1C in germ cells is required for oogenesis. Notably, overexpression of OMA-1::GFP partially rescued the oogenesis defect in the pafo-1 mutants. Based on our findings, we propose that the PAF1C promotes oogenesis in a cell-autonomous manner by positively regulating the expression of genes involved in oocyte maturation.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsCell NucleusOogenesisRNA Polymerase IICaenorhabditis elegans ProteinsRNA Polymerase IIC. elegansgerm cellgerm line developmentOMA-1oocytesoogenesisPAFO-1::mCherry transgeneRNAiRNA polymerase II-associated factor 1 complextranscriptional regulation

Identifiers

PMID35430776
PMCPMC9321568
OpenAlexW4225472201

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.