Evidence map›Paper›PMID 35430685›Full record

ArticleMolecular biology reports2022

A novel system for the generation of baculoviruses mutant for an essential gene.

Wujie Su, Jianwei Qu, Yuying Ren, Wenbing Wang, Fanchi Li, Bing Li

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wujie SuSchool of Basic Medicine and Biological Sciences, Soochow University, Suzhou, 215123, Jiangsu, People's Republic of China.ORCID http://orcid.org/0000-0003-2634-5421
Jianwei QuSchool of Basic Medicine and Biological Sciences, Soochow University, Suzhou, 215123, Jiangsu, People's Republic of China.ORCID http://orcid.org/0000-0003-3825-5618
Yuying RenSchool of Basic Medicine and Biological Sciences, Soochow University, Suzhou, 215123, Jiangsu, People's Republic of China.ORCID http://orcid.org/0000-0002-9566-2116
Wenbing WangDepartment of Preventive Medicine and Public Health Laboratory Science, School of Medicine, Jiangsu University, 301 Xuefu Road, Zhenjiang, 212013, Jiangsu, China.ORCID http://orcid.org/0000-0002-4964-2405
Fanchi LiSchool of Basic Medicine and Biological Sciences, Soochow University, Suzhou, 215123, Jiangsu, People's Republic of China.ORCID http://orcid.org/0000-0002-7640-9019
Bing LiSchool of Basic Medicine and Biological Sciences, Soochow University, Suzhou, 215123, Jiangsu, People's Republic of China. lib@suda.edu.cn.ORCID http://orcid.org/0000-0001-6504-2728
Soochow University · CNJiangsu University · CN

Funding

the grants from National Natural Science Foundation of China 32172795the Jiangsu Agriculture Science and Technology Innovation Fund (JASTIF) CX(21)2039the Science & Technology support Program of Suzhou SNG201912the Science & Technology support Program of Suzhou SNG201925the Young Elite Scientists Sponsor ship Program by CAST 2018QNRC001
6 · The paper itself

Abstract

backgroundCurrently, to delete an essential gene from a baculovirus genome, a cell line stably expressing the gene to be knocked-out should be first generated, which is time-consuming. Alternatively, essential genes can be deleted in E. coli using the λ Red recombination system, which requires an electroporation system. Here, based on homologous recombination in insect cells, we develop an alternative efficient system that requires neither generation of a cell line nor an electroporation system. METHODS AND

resultsUsing puc19-based inverse PCR, a transfer vector for deleting BmNPV orf92 (Bm92, an essential gene) was efficiently constructed. A copy of Bm92 was introduced into the polyhedrin locus of BmNPV bacmid. The transfer vector was then co-transfected into BmN cell with the modified bacmid to enable homologous recombination at the Bm92 locus. An agarose-free approach was developed for the purification of Bm92-disrupted bacmid viruses in insect cells. Subsequently, BmN cells were co-infected with purified Bm92-disrupted bacmid viruses and unmodified bacmid viruses to allow recombination at the Tn7 insertion site between the two viruses. Finally, bacmid DNA extracted from BmN cells was transformed into chemically-treated competent DH10B cells, and blue colonies containing Bm92-disrupted bacmid were selected using PCR.

conclusionsFor its efficiency and convenience, the system has great potential to be used for the generation of baculovirus knockout mutants.

Indexed as

BombyxNucleopolyhedrovirusesAnimalsBaculoviridaeEscherichia coliGenes, EssentialGenetic VectorsBm92BmNPV bac-to-bac expression systemGene knockoutorf92PurificationTransfer vector construction

Identifiers

PMID35430685
OpenAlexW4224143813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.