Evidence map›Paper›PMID 35429498›Full record

ArticleThe Journal of biological chemistry2022

The reductive half-reaction of two bifurcating electron-transferring flavoproteins: Evidence for changes in flavin reduction potentials mediated by specific conformational changes.

Wayne Vigil, Jessica Tran, Dimitri Niks, Gerrit J Schut, Xiaoxuan Ge, Michael W W Adams, Russ Hille

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Rapid-reaction kinetics of the bifurcating NADThe Journal of biological chemistry · 2023
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Wayne VigilDepartment of Biochemistry, University of California, Riverside, California, USA.
Jessica TranDepartment of Biochemistry, University of California, Riverside, California, USA.
Dimitri NiksDepartment of Biochemistry, University of California, Riverside, California, USA.
Gerrit J SchutDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Xiaoxuan GeDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Russ HilleDepartment of Biochemistry, University of California, Riverside, California, USA. Electronic address: russ.hille@ucr.edu.
University of California, Riverside · USUniversity of Georgia · US

Funding

Mechanistic studies of a bifurcating flavoproteinR01GM135088 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI HILLE, RUSS · 2020 to 2023
$1.3M
NIGMS NIH HHS R01 GM135088
6 · The paper itself

Abstract

The EtfAB components of two bifurcating flavoprotein systems, the crotonyl-CoA-dependent NADH:ferredoxin oxidoreductase from the bacterium Megasphaera elsdenii and the menaquinone-dependent NADH:ferredoxin oxidoreductase from the archaeon Pyrobaculum aerophilum, have been investigated. With both proteins, we find that removal of the electron-transferring flavin adenine dinucleotide (FAD) moiety from both proteins results in an uncrossing of the reduction potentials of the remaining bifurcating FAD; this significantly stabilizes the otherwise very unstable semiquinone state, which accumulates over the course of reductive titrations with sodium dithionite. Furthermore, reduction of both EtfABs depleted of their electron-transferring FAD by NADH was monophasic with a hyperbolic dependence of reaction rate on the concentration of NADH. On the other hand, NADH reduction of the replete proteins containing the electron-transferring FAD was multiphasic, consisting of a fast phase comparable to that seen with the depleted proteins followed by an intermediate phase that involves significant accumulation of FAD⋅

Indexed as

Electron-Transferring FlavoproteinsOxidoreductasesElectron TransportFerredoxinsFlavin-Adenine DinucleotideFlavinsNADOxidation-ReductionProtein Structure, TertiaryElectron-Transferring FlavoproteinsFerredoxinsFlavin-Adenine DinucleotideFlavinsNADOxidoreductaseselectron bifurcationelectron paramagnetic resonanceelectron-transferring flavoproteinrapid-reaction kinetics

Identifiers

PMID35429498
PMCPMC9127580
OpenAlexW4224081812

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.