Evidence map›Paper›PMID 35428176›Full record

ArticleBMC genomics2022

Construction of a high-density genetic map and identification of QTLs related to agronomic and physiological traits in an interspecific (Gossypium hirsutum × Gossypium barbadense) F

Zhanfeng Si, Shangkun Jin, Jiedan Chen, Sen Wang, Lei Fang, Xiefei Zhu, Tianzhen Zhang, Yan Hu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Genetic dissection of foxtail millet bristles using combined QTL mapping and RNA-seq.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Genetic dissection of lint percentage in short-season cotton using combined QTL mapping and RNA-seq.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zhanfeng Si *Agronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China.
Shangkun Jin *Agronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China.
Jiedan ChenAgronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China.
Sen WangState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cotton Hybrid R & D Engineering Center (the Ministry of Education), College of Agriculture, Nanjing Agricultural University, 210095, Nanjing, China.
Lei FangAgronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China.
Xiefei ZhuState Key Laboratory of Crop Genetics and Germplasm Enhancement, Cotton Hybrid R & D Engineering Center (the Ministry of Education), College of Agriculture, Nanjing Agricultural University, 210095, Nanjing, China.
Tianzhen ZhangAgronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China.
Yan HuAgronomy Department, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310029, China. 0016211@zju.edu.cn.
Zhejiang University · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAdvances in genome sequencing technology, particularly restriction-site associated DNA sequence (RAD-seq) and whole-genome resequencing, have greatly aided the construction of cotton interspecific genetic maps based on single nucleotide polymorphism (SNPs), Indels, and other types of markers. High-density genetic maps can improve accuracy of quantitative trait locus (QTL) mapping, narrow down location intervals, and facilitate identification of the candidate genes.

resultIn this study, 249 individuals from an interspecific F

conclusionOur research illustrates the efficiency of constructing a genetic map using binmap and QTL mapping on the basis of a certain size of the early-generation population. High-density genetic map features high recombination exchanges in number and distribution. The QTLs and the candidate genes identified based on this high-density genetic map may provide important gene resources for the genetic improvement of cotton.

Indexed as

GossypiumQuantitative Trait LociChromosome MappingCotton FiberPhenotypeSequence Analysis, DNAAgronomic and physiological traitsCottonGenetic mapQTL mappingRe-sequencing

Identifiers

PMID35428176
PMCPMC9013169
OpenAlexW4224054193

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.