Evidence map›Paper›PMID 35423271›Full record

ArticleRSC advances2021

Discovery of fragments inducing conformational effects in dynamic proteins using a second-harmonic generation biosensor.

Edward A FitzGerald, Margaret T Butko, Pierre Boronat, Daniela Cederfelt, Mia Abramsson, Hildur Ludviksdottir, Jacqueline E van Muijlwijk-Koezen, Iwan J P de Esch, Doreen Dobritzsch, Tracy Young and 1 more

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Target Engagement Assays in Early Drug Discovery.Journal of medicinal chemistry · 2025
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 5 countries.

Edward A FitzGeraldDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.ORCID https://orcid.org/0000-0002-0603-1241
Margaret T ButkoBiodesy, Inc. 170 Harbor Way South San Francisco 94080 CA USA.
Pierre BoronatAmsterdam Institute of Molecular and Life Sciences (AIMMS), Division of Medicinal Chemistry, Faculty of Science, Vrije Universiteit Amsterdam De Boelelaan 1108 1081 HZ Amsterdam The Netherlands.
Daniela CederfeltDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.
Mia AbramssonDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.ORCID https://orcid.org/0000-0002-8184-0145
Hildur LudviksdottirDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.
Jacqueline E van Muijlwijk-KoezenAmsterdam Institute of Molecular and Life Sciences (AIMMS), Division of Medicinal Chemistry, Faculty of Science, Vrije Universiteit Amsterdam De Boelelaan 1108 1081 HZ Amsterdam The Netherlands.
Iwan J P de EschAmsterdam Institute of Molecular and Life Sciences (AIMMS), Division of Medicinal Chemistry, Faculty of Science, Vrije Universiteit Amsterdam De Boelelaan 1108 1081 HZ Amsterdam The Netherlands.
Doreen DobritzschDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.
Tracy YoungBiodesy, Inc. 170 Harbor Way South San Francisco 94080 CA USA.
U Helena DanielsonDepartment of Chemistry - BMC, Uppsala University Uppsala 751 23 Sweden helena.danielson@kemi.uu.se.ORCID https://orcid.org/0000-0003-2728-0340
Uppsala University · SEHZ University of Applied Sciences · NLInstitute for Biodiversity · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biophysical screening of compound libraries for the identification of ligands that interact with a protein is efficient, but does typically not reveal if (or how) ligands may interfere with its functional properties. For this a biochemical/functional assay is required. But for proteins whose function is dependent on a conformational change, such assays are typically complex or have low throughput. Here we have explored a high-throughput second-harmonic generation (SHG) biosensor to detect fragments that induce conformational changes upon binding to a protein in real time and identify dynamic regions. Multiwell plate format SHG assays were developed for wild-type and six engineered single-cysteine mutants of acetyl choline binding protein (AChBP), a homologue to ligand gated ion channels (LGICs). They were conjugated with second harmonic-active labels

Identifiers

PMID35423271
PMCPMC8694943
OpenAlexW3133087471

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.