ArticleNature communications2022
Chromosome evolution and the genetic basis of agronomically important traits in greater yam.
Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.
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Who cites it
47 citing papers in PubMed.
- Haplotype-resolved genome assembly of a male Dioscorea alata cultivar reveals the structure and evolution of young sex chromosomes.The Plant journal : for cell and molecular biology · 2026Article
- Chromosome-level genome assembly of the wild Chinese yam Dioscorea opposita.Scientific data · 2026Article
- Whole-genome sequencing reveals a possible molecular basis of sex determination in the dioecious wild yam Dioscorea tokoro.PLoS genetics · 2026Article
- A haplotype-resolved chromosome-level genome assembly of autotetraploid Chinese yam (Horticulture research · 2026Article
- Genomic and Functional Analysis of the ALOG Gene Family inPlants (Basel, Switzerland) · 2026Article
- Genome-wide association study revealed genomic regions associated with tuber quality traits in water yam (Dioscorea alata L.).PloS one · 2026Article
- Transcriptomic profiling analysis provides new insights into molecular mechanisms of adventitious rooting recalcitrance in yam vine cuttings.BMC plant biology · 2025Article
- Identification and analysis of genomic regions influencing leaf morpho-physiological traits related to stress responses in greater yam (Dioscorea alata L.).BMC plant biology · 2025Article
- Pan-genomic insights into RLK family evolution and adaptation in Dioscorea alata.Plant molecular biology · 2025Article
- Intraspecific Genetic Diversity Analyses of Yam (Ecology and evolution · 2025Article
- Genome wide association studies in yam reveal the challenge of high heterozygosity.Scientific reports · 2025Article
- Review
- A telomere-to-telomere genome assembly for greater yam (Dioscorea alata).Plant communications · 2025Article
- Genomic and epigenomic insight into giga-chromosome architecture and adaptive evolution of royal lily (Lilium regale).Nature communications · 2025Article
- Insights into membrane-bound fatty acid desaturase genes in tigernut (Cyperus esculentus L.), an oil-rich tuber plant in Cyperaceae.BMC plant biology · 2025Article
- Integrative Analysis Provides Insights into Genes Encoding LEA_5 Domain-Containing Proteins in Tigernut (Plants (Basel, Switzerland) · 2025Article
- Effects of mode of reproduction on genetic polymorphism and divergence in wild yams (Dioscoreaceae:Plant diversity · 2025Article
- Deciphering the landscape and evolutionary trajectory of NLR immune receptors in Dioscorea alata.Plant molecular biology · 2024Article
- Extent and patterns of morphological and molecular genetic diversity and population structure of Nigerian Taro cultivars.BMC plant biology · 2024Article
- Characterization of active transposable elements and their new insertions in tuber propagated greater yam (Dioscorea alata).BMC genomics · 2024Article
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33 authors.
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Abstract
The nutrient-rich tubers of the greater yam, Dioscorea alata L., provide food and income security for millions of people around the world. Despite its global importance, however, greater yam remains an orphan crop. Here, we address this resource gap by presenting a highly contiguous chromosome-scale genome assembly of D. alata combined with a dense genetic map derived from African breeding populations. The genome sequence reveals an ancient allotetraploidization in the Dioscorea lineage, followed by extensive genome-wide reorganization. Using the genomic tools, we find quantitative trait loci for resistance to anthracnose, a damaging fungal pathogen of yam, and several tuber quality traits. Genomic analysis of breeding lines reveals both extensive inbreeding as well as regions of extensive heterozygosity that may represent interspecific introgression during domestication. These tools and insights will enable yam breeders to unlock the potential of this staple crop and take full advantage of its adaptability to varied environments.
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