Evidence map›Paper›PMID 35421940›Full record

ArticleBMC cancer2022

Association of a novel 27-gene immuno-oncology assay with efficacy of immune checkpoint inhibitors in advanced non-small cell lung cancer.

Harsha Ranganath, Amit L Jain, Justin R Smith, Julie Ryder, Amina Chaudry, Emily Miller, Felicia Hare, Poojitha Valasareddy, Robert S Seitz, David R Hout and 7 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. The Immune-Related 27-Gene Signature DetermaIO Predicts Response to Neoadjuvant Atezolizumab plus Chemotherapy in Triple-Negative Breast Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Harsha RanganathDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Amit L JainDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Justin R SmithDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Julie RyderWest Cancer Center and Research institute, 7945 Wolf River Blvd, Germantown, TN, 38138, USA.
Amina ChaudryDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Emily MillerDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Felicia HareDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Poojitha ValasareddyDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA.
Robert S SeitzOncocyte Corporation, Nashville, TN, USA.
David R HoutOncocyte Corporation, Nashville, TN, USA.
Matthew G VargaOncocyte Corporation, Nashville, TN, USA.
Brock L SchweitzerOncocyte Corporation, Nashville, TN, USA.
Tyler J NielsenOncocyte Corporation, Nashville, TN, USA.
Janice MullinsWest Cancer Center and Research institute, 7945 Wolf River Blvd, Germantown, TN, 38138, USA.
Douglas T RossOncocyte Corporation, Nashville, TN, USA.
David R GandaraDepartment of Internal Medicine, UC Davis Medical Center, Sacramento, CA, USA.
Gregory A VidalDivision of Hematology/Oncology, University of Tennessee Health Sciences Center, Memphis, TN, USA. Gvidal@westclinic.com.
University of Tennessee Health Science Center · USWest Cancer Center · USUniversity of California Davis Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundImmune checkpoint inhibitor (ICI) therapies represent a major advance in treating a variety of advanced-stage malignancies. Nevertheless, only a subset of patients benefit, even when selected based on approved biomarkers such as PD-L1 and tumor mutational burden. New biomarkers are needed to maximize the therapeutic ratio of these therapies.

methodsIn this retrospective cohort, we assessed a 27-gene RT-qPCR immuno-oncology (IO) gene expression assay of the tumor immune microenvironment and determined its association with the efficacy of ICI therapy in 67 advanced-stage NSCLC patients. The 27-gene IO test score (IO score), programmed cell death ligand 1 immunohistochemistry tumor proportion score (PD-L1 TPS), and tumor mutational burden (TMB) were analyzed as continuous variables for response and as binary variables for one-year progression free survival. The threshold for the IO score was prospectively set based upon a previously described training cohort. Prognostic implications of the IO score were evaluated in a separate cohort of 104 advanced-stage NSCLC patients from The Cancer Genome Atlas (TCGA) who received non-ICI therapy.

resultsThe IO score was significantly different between responders or non-responders (p = 0.007) and associated with progression-free survival (p = 0.001). Bivariate analysis established that the IO score was independent of PD-L1 TPS and TMB in identifying patients benefiting from ICI therapy. In a separate cohort of late-stage NSCLC patients from TCGA, the IO score was not prognostic of outcome from non-ICI-treated patients.

conclusionsThis study is the first application of this 27-gene IO RT-qPCR assay in a clinical cohort with outcome data. IO scores were significantly associated with response to ICI therapy and prolonged progression-free survival. Together, these data suggest the IO score should be further studied to define its role in informing clinical decision-making for ICI treatment in NSCLC.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsB7-H1 AntigenBiomarkers, TumorHumansImmune Checkpoint InhibitorsRetrospective StudiesTumor MicroenvironmentB7-H1 AntigenBiomarkers, TumorImmune Checkpoint InhibitorsGene expression profilingImmunotherapyProgrammed death ligand 1Tumor biomarkersTumor microenvironment

Identifiers

PMID35421940
PMCPMC9008990
OpenAlexW4223924422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.